Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4137 |
Symbol | |
ID | 5541648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5355178 |
End bp | 5356473 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896248 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001434186 |
Protein GI | 156744057 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000953773 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACATCG GCGTTGACAT TTCGCTCCTG CGAATTGCTC AGGCAGGCGT GCTGACCTAT CATCGGTCGC TGCTCGACCA TCTGGTGCGA GCCGGGCGTG ATTGCCATTT TACGCTGATC GATGTGCTGC CGCTCAACCC TGGCCGTTCG ATGCTGTGGC TGGCAGCCCT CGACTCGCCG AATGTGCGGG TCGTGCGTTG CCCCGGCGTT CGGCGTGGCT ACCTGAGCGC GCTTCCTGCG TTTCGTGATG GAGTGGCGCA TCCGATTGCG GCGCGGATCG ACCGCATCCT CGATCCAATC TGGTCGCAAC TGGCGGTCGC CGAGATGGGG CTGGAACTCA GGGGCGCCAC GAGGTTCGTT GAGGTCTTTC ATGCTTCCGA TCAATTGCCT TATGCACCGC CTGGCGCTGC AACCGTGCTG ACCATTCACG ATCTGACCAC CCGGCGCTTC CCCGATATGC ATGTGGCGGA GAACGTTGCG TTGCATGCAG CCAAGGAGCG ATTTGCCCGC GACCGCGCCG ACCGGATTAT TGCCGTGTCG GAAGCGACCC GCCGTGATAT TGTGTGCGAA CTGGGCATTC CGCCTGAGCG GATCAGTGTG GTGTATGAAG CCGCAGATGT GCGCTTTCGT CCACGCGCGC CGGATGAAAC GTGTTCGGTT CTGGCGCGAT ACGATATAGC GCATGGCGCG TATGTGCTGA GTGTTGGCAC GCTCGAGCCG CGCAAGAACT ACATCCGTTT GATCGAAGCG TATGCCGTGT TGTGTGCGCG GTATGCCGCA GATGCGCGTC GTTTGCCGCC GTTGATTATT GCCGGCGGCT ACGGCTGGAA GCACGACGCG ATCCTCGCCG CGCCGGAACG CGCCGGAGTT GCCGGACAGG TCCGATTTAT CGGGCGCATT CCCGATGACG ACCTGCCTGC ACTGGTTGCC GGGGCGCGCC TGTTTGTGTA TCCTTCACTG TACGAAGGGT TTGGTCTTCC GCCGCTGGAG GCGCTTGCTT CAGGAACGCC GGTGGTGGTG GCAAACACCT CATCGCTGCC GGAGGTGGTT GGCGATGCCG GATTGTACTG CGATCCGTAT CAGGTGAGCG ATATTGCGCG CCAGATCGCT GCACTCCTGG ACAGCGAGGA CCTGGCGTTG CGGTTACGGC ACGCTGGAAT TGAACGCGCA AAGCAGTTCT CGTGGGAGCG CGCTGCCCGT GAAACGCTTG CAGTCTATGC GCAGGCGCGC GCTGAACGCT GTGCGAGGCG ACGATGGCAA TTTACTGGGT TCATTCCGAC AGCGATGACG CGCTGA
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Protein sequence | MHIGVDISLL RIAQAGVLTY HRSLLDHLVR AGRDCHFTLI DVLPLNPGRS MLWLAALDSP NVRVVRCPGV RRGYLSALPA FRDGVAHPIA ARIDRILDPI WSQLAVAEMG LELRGATRFV EVFHASDQLP YAPPGAATVL TIHDLTTRRF PDMHVAENVA LHAAKERFAR DRADRIIAVS EATRRDIVCE LGIPPERISV VYEAADVRFR PRAPDETCSV LARYDIAHGA YVLSVGTLEP RKNYIRLIEA YAVLCARYAA DARRLPPLII AGGYGWKHDA ILAAPERAGV AGQVRFIGRI PDDDLPALVA GARLFVYPSL YEGFGLPPLE ALASGTPVVV ANTSSLPEVV GDAGLYCDPY QVSDIARQIA ALLDSEDLAL RLRHAGIERA KQFSWERAAR ETLAVYAQAR AERCARRRWQ FTGFIPTAMT R
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