Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4120 |
Symbol | |
ID | 5541631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5333563 |
End bp | 5334453 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640896232 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001434170 |
Protein GI | 156744041 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00365351 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAGAC TGACCAATAC ACTGAAGACT ACGGCTCTGC TGGGGGCGCT GACGGTGCTG CTCGTCCTGG CGGGACAGTG GTTCGGCGGC ACGCAGGGCA TGATCATTGC ATTCGTTCTC GCCGTCTTGA TGAATGGCGG CGCCTACTGG TTCTCGGATA AACTGGCGTT GAGCATGGCC GGCGCGCGCG CAATCAGCCG GTACGAAGCG CCGCGTCTCT ACCAGATGGT CGCACACCTG GCGCAGCGCG CGAACCTGCC GATGCCGCGC GTCTATCTGA TCGACTCGGA GGCGCCAAAT GCGTTTGCCA CCGGTCGCGA CCCGCAGCAC GGTGCGGTTG CCGTCACGAC CGGACTGCTC CAACTGCTGA ATGACGACGA GGTTGCAGCA GTTATCGCCC ACGAATTGGG GCACATCAAA AACCGCGATA CGCTCATCAG CACGATTGCG GCGACGTTCG CCGGCGCAGT CGCCATCCTG GCGGATATGG CGCAGTGGGC ATTGCTCCTC GGCGGCTTTG GACGCCACGA GGACGACGGC GAGGAGAGCG GTCTGGCAGG TCTGGTGAGC GGGTTGCTGC TCATTCTGGT GGCGCCGATT GCTGCGACGC TGATCCAGTT GGCGATTTCG CGCACCCGCG AATTCGAGGC GGACGCCGCC GGCGCGACGA TCAGCGGATC GCCGTTGGCG CTGGCGTCGG CGCTGCGCAA GATCGAAGCA TGGAAGCAGC GTCTGCCGCT TGCGACCAAT CCGGCGATGG CAAACCTGTA CATTATCAAT CCGCTCGATG GTGGCACTCT TGTGAAACTG TTCAGCACCC ATCCGCCAAC CACAGAGCGT ATTGCGCGGC TGGAGCGGAT GGCAATCCGG CAGCATGCGC TGGTCTGGTA A
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Protein sequence | MTRLTNTLKT TALLGALTVL LVLAGQWFGG TQGMIIAFVL AVLMNGGAYW FSDKLALSMA GARAISRYEA PRLYQMVAHL AQRANLPMPR VYLIDSEAPN AFATGRDPQH GAVAVTTGLL QLLNDDEVAA VIAHELGHIK NRDTLISTIA ATFAGAVAIL ADMAQWALLL GGFGRHEDDG EESGLAGLVS GLLLILVAPI AATLIQLAIS RTREFEADAA GATISGSPLA LASALRKIEA WKQRLPLATN PAMANLYIIN PLDGGTLVKL FSTHPPTTER IARLERMAIR QHALVW
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