Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4112 |
Symbol | |
ID | 5541623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5324413 |
End bp | 5325657 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640896224 |
Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
Protein accession | YP_001434162 |
Protein GI | 156744033 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.889687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0200545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACAA CGATCGTGAT CGGCGCAGGG TTGAGTGGAT TGATGGGCGC GCTGGCGCTG GCAGAAGCCG GACTGCGGCC GCTGGTGCTG GCGAAGGGGC AGGGAGCGAC CCACTGGACC GCTGGCACGG TTGATATCTG GGGCGGCGAT GAACGTTCGC CGCGCGAGGC GCTTCAGGAG ATCGGCGCAT TACACCCGCA TCACCCATAC GCGCTCATCG GCGCGCACGC CGTGGAGGAA GCCATTGTGC GCTTTCGCGC ACTGACCGAG GCGGCGCGGT ATCCGTATGT CGGCGGGCTG GATCGGAATA TTTTGTTGCC GACGTCGGCA GGTGCGCTGC GGCCGGCTGC GCTCCTGCCG GTGACGATGG CGGCCGGCGA TGTGCGACTC GGCGGGACAA TGCTGATTGC CGGGTTCCGT GAATTGCGCG ATTTTTATCC GCCGTTCATC GCCGCCAACC TGGCTGCGCA GGGAATGGCA GCGCGCGGCG TCTACCTGAC CATTCCACCT GCCTTCCGCA GACGTGAATA CAACCCGGTG ACATTTGCGC GTCTGTTCGA TAATCCGGCG TTTTGCAGCG ATATTGGCAG GCAATTGCGC GCACAACGCG GCGATGCAAC CCGGATCGGG CTGCCGGCGG TGCTCGGGTT GCGCGATCCG ACAGGGGTTG TCGCCCATTT GCAGGACGAG AGCGGCGCGC AAATCTTCGA GATTCCGACA TTGCCGCCGT CCGTTCCGGG TATGCGACTG TTTGCCCTCT TTCAGAATGC CATCGAACAG GCAGGCGGTC GCGTGCAGAT TGGATCGGAA GTGATCTGCG GCGATGGACG GGATCGTCTG TTGACGACCG TGTGGAGCGA GGCGGCGGCG CGCCGGCAGG AACATCGCGT CGAGCGCGCG CTGCTGGCAA CCGGCGGAGT TGCGGGTGGC GGCATTCGGA CTGACCATAT GGGAATGGTG CGCGAAACGG CGCTCGATTT GCCGGTGCGT GCGCCGGCGA ACCGCGCCGC CTGGTTTGCG CCGCGTTTCC TCGATCCGCA GGGACACGCC ATCTACACGG CCGGCGTCGC AACCGATGCG CACCTTCGAC CGATCGGGAC CGATGGCGCC GTTGTGTATG ACAATGTGAC AGTCGCCGGC GCACTACTGG CTGGAACCGA CACCGTCCGT GAACGCAGTC GGAGTGGCGT TTCCCTCGCC ACTGGATGGG CAGCCGGACG CATACTGGCA GAATGGATGG CATGA
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Protein sequence | MRTTIVIGAG LSGLMGALAL AEAGLRPLVL AKGQGATHWT AGTVDIWGGD ERSPREALQE IGALHPHHPY ALIGAHAVEE AIVRFRALTE AARYPYVGGL DRNILLPTSA GALRPAALLP VTMAAGDVRL GGTMLIAGFR ELRDFYPPFI AANLAAQGMA ARGVYLTIPP AFRRREYNPV TFARLFDNPA FCSDIGRQLR AQRGDATRIG LPAVLGLRDP TGVVAHLQDE SGAQIFEIPT LPPSVPGMRL FALFQNAIEQ AGGRVQIGSE VICGDGRDRL LTTVWSEAAA RRQEHRVERA LLATGGVAGG GIRTDHMGMV RETALDLPVR APANRAAWFA PRFLDPQGHA IYTAGVATDA HLRPIGTDGA VVYDNVTVAG ALLAGTDTVR ERSRSGVSLA TGWAAGRILA EWMA
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