Gene Rcas_4103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4103 
Symbol 
ID5541614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5317294 
End bp5317635 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content57% 
IMG OID640896215 
Producthypothetical protein 
Protein accessionYP_001434153 
Protein GI156744024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00117348 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.056251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC AGCAACCAAC GGCGCAAACG TGGAAACGCG GCGCTGCGGT CTGGGGACTC 
TGGCTGTTGG TATTGGGACT GGCAGCCATC GTTATCTACG CCATCTGGTT GCGCGCCTTC
TTCGAGATCT ACTATGTATG GCTGAGTCTG GGTGATGCGA CGCGACTGGT CTACGAACTG
ACGATGATCA TCCTGACCAT CGGCGTGGTG ACGTGGATAG CGATCGGTGA GCCGTATCTG
GCGGCCGGCG CTCGCGCGAA TCGGCTGATG CGCCGTTTCT GGTATGTTGC CATACCGCTG
CTGACAGCCG GCGCAATAGG ATTGATCATT CCAATGATAT AA
 
Protein sequence
MIDQQPTAQT WKRGAAVWGL WLLVLGLAAI VIYAIWLRAF FEIYYVWLSL GDATRLVYEL 
TMIILTIGVV TWIAIGEPYL AAGARANRLM RRFWYVAIPL LTAGAIGLII PMI