Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4103 |
Symbol | |
ID | 5541614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5317294 |
End bp | 5317635 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640896215 |
Product | hypothetical protein |
Protein accession | YP_001434153 |
Protein GI | 156744024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00117348 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.056251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATC AGCAACCAAC GGCGCAAACG TGGAAACGCG GCGCTGCGGT CTGGGGACTC TGGCTGTTGG TATTGGGACT GGCAGCCATC GTTATCTACG CCATCTGGTT GCGCGCCTTC TTCGAGATCT ACTATGTATG GCTGAGTCTG GGTGATGCGA CGCGACTGGT CTACGAACTG ACGATGATCA TCCTGACCAT CGGCGTGGTG ACGTGGATAG CGATCGGTGA GCCGTATCTG GCGGCCGGCG CTCGCGCGAA TCGGCTGATG CGCCGTTTCT GGTATGTTGC CATACCGCTG CTGACAGCCG GCGCAATAGG ATTGATCATT CCAATGATAT AA
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Protein sequence | MIDQQPTAQT WKRGAAVWGL WLLVLGLAAI VIYAIWLRAF FEIYYVWLSL GDATRLVYEL TMIILTIGVV TWIAIGEPYL AAGARANRLM RRFWYVAIPL LTAGAIGLII PMI
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