Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4100 |
Symbol | |
ID | 5541611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5312726 |
End bp | 5313190 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640896212 |
Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
Protein accession | YP_001434150 |
Protein GI | 156744021 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.39959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.110814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCACG TGAGTTACGA TGCCGATCCG GTGGAGCGAG TCGTTGAGTT GCATTTGCCC AGTCGTCTTG GTTACGAAAA AGTCGCAATG GACGCTGCCG CATCAATTGC ACGGCGCATG GGGTTCAGCG CGGATCGCAT CGATGCGCTG CGCACGGCGC TCGCTGAAGC GGTGACCAAT GCCATCGAAC ATGGCAATGC CCACGACGAT GGCATGCGCG TGCTGATCAT TCTGACAGTA CGACCATCTG AACTTGTCGT CAGTGTTGCC GATCAGGGGA TGAAATCGAT TGATCAATCA CATCTGGCGC CGGCGCCTCG GATCGAAGAC TCGTTTGCCC GTGCCGATAA AGGCGGTTGG GGCATCTGGT TGATACGTGA ATTGATGGAC GAGGTGGAGT TTACCACAGC GCCAACCGGC GGCAATCAGG TGCGGATGGT CATTCATCTC GAAAAGCAAC CGTAA
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Protein sequence | MAHVSYDADP VERVVELHLP SRLGYEKVAM DAAASIARRM GFSADRIDAL RTALAEAVTN AIEHGNAHDD GMRVLIILTV RPSELVVSVA DQGMKSIDQS HLAPAPRIED SFARADKGGW GIWLIRELMD EVEFTTAPTG GNQVRMVIHL EKQP
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