| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4079 |
|---|
| Symbol | |
|---|
| ID | 5541590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5292031 |
|---|
| End bp | 5292699 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640896191 |
|---|
| Product | ribosomal-protein-alanine acetyltransferase |
|---|
| Protein accession | YP_001434129 |
|---|
| Protein GI | 156744000 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | [TIGR01575] ribosomal-protein-alanine acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.29051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGTACT ACTTCGTCGA GCGAATGACC GAGGATGATA TCGAGCAGGT GCAGGTGATC
GAGCGCGCCA GTTTCAGCAC GCTCTGGTCA GCCAGCACCT ATCGTCATGA GTTGCGGTCG
CCGGCGACGA GTCGGTACAT TGTTGCGCGC GCTTCCTCGA CGCCGCCGCC GCCGCGAACG
GAGCGTTCCG CGCCTCGACG CGGTTTGCTC GCAAGTTTGC TCCCGATGCT TTCAGTGCGG
CAAACGTCTG TGCGCGACTT TCCGATTGTT GGCTATGGCG GTGTCTGGTT GAGCGTCGAT
GAAGGGCATA TTACTACCAT TGCCGTGGCG CCTGCCTATC GCGGGCGCGG GCTTGGGGAA
TTGTTGCTCA ACGGGTTGAT CGATCAGGCG CTCGACCTGA ATGCCGATGT GCTGACGCTG
GAGGTGCGCG TCAGCAACAT TGTTGCGCAA CAACTGTACC TGAAGTATGG CTTTCGTCCG
GCGGGAACGC GCCCTCGCTA TTATACCGAT AATGGCGAGG ACGCGCTGAT TATGTGGACG
GATCCGATCC GTAGCCAGGC ATACCAGGAG CGACTACAGC AGCTCCGTGA GCAATTGTTT
GCCCGATTGC GCGAGGAGGC GAATGAACCA GGTCCGTTGC GCAACAATCT GCGCCTCGGA
ACGGAGTAA
|
|---|
| Protein sequence | MVYYFVERMT EDDIEQVQVI ERASFSTLWS ASTYRHELRS PATSRYIVAR ASSTPPPPRT
ERSAPRRGLL ASLLPMLSVR QTSVRDFPIV GYGGVWLSVD EGHITTIAVA PAYRGRGLGE
LLLNGLIDQA LDLNADVLTL EVRVSNIVAQ QLYLKYGFRP AGTRPRYYTD NGEDALIMWT
DPIRSQAYQE RLQQLREQLF ARLREEANEP GPLRNNLRLG TE
|
|---|
| |