| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4071 |
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| Symbol | |
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| ID | 5541582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5284590 |
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| End bp | 5285717 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896183 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001434121 |
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| Protein GI | 156743992 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.507876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGC TGACCATTGT GGCGCTGCTG AGCGCCTTTA TGATCGCCTT CATCGTGACC
GCGCTGACGG TTCCTCCGGT GATTCGCCTC TGCGAACGAC GCGGATGGAT GCAGCAGCCC
GGCGGTCGCC GCACCCATCC GCACCCTACT GCAAATGTGG GCGGCATCGC CATGTATGTT
GGCTTCGTAA CAGCGATCCT TGCCACATTC ATCTTTAGCG CACTCGACCC GGCGCTGCGC
CGCTCGGAGT TCGAGGTGTT GCGCATCGGG TTGCTCCTGA CCGGCGGAAC GCTCATTTTT
CTGGTCATGT GGCTCGATGA TGTGGTCGAG CTTCCATGGT TCCCCAAGTT TGCGGCACAG
ATTGGCGCAG CACTCATTGC AGTCGGTCCG TACCTCTGGG ACCAGCGGCG CTACCCCGAC
ACACTGGGGT TGCTCACCGA AGCGCGCGGC ATTCTGCTGA CCGCCTTCAA CGCGCCGTTC
GTCGGGCAGG TCAGCCTGTG GGATGTCAGC CCATGGCTGG CAATCCTGGC AACGGTCTTC
TGGCTTGGCT GGATGGCCAA TACCATCAAC TGGTCGGACG GTCTTGATGG TCTGGCGGCT
GGCGTGTCGC TGATCGCGGC GTTTATGCTG GCGCTTCATG CACTCAGGCT CGACCCGCCG
CAAACAACGA TTGCGCTGCT GCCACTCGCG CTCGCCGGGA CATGCGCCGG ATTTCTGATC
TTCAACCTTC CCCCGGCACG GATTTTCATG GGTGACAGCG GTGCAGAGTT TCTCGGTTTC
ATCCTTGGCG TCAGCGCGAT CATCGGCGGG GCGAAACTGG CGACGGTGCT CCTGGTGCTG
GGTGTGCCGA TCCTCGATGT CGCATGGCTG ATCGTGGCAC GCACGGTCAG CGGCAAACAA
CCGATGCGTG GCGGACGTGA TCACCTGCAT CATCGCCTGC TGGACGGCGG CATGTCGCCA
CGCCAGATTC TGGCGCTTTA CTGGGGGCTG AGCGCAGGCT TTGGGTTGCT CGGCATCACC
GACATTAGCC CCTACGCCAA GTTGATCGGT CTGGCGCTGC TGATTCTGAT CGGCATCGGA
TTGATCGCTT ATGCCACACG CCGGGTGACG CTGCGATCGG TGCAGTAA
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| Protein sequence | MSLLTIVALL SAFMIAFIVT ALTVPPVIRL CERRGWMQQP GGRRTHPHPT ANVGGIAMYV
GFVTAILATF IFSALDPALR RSEFEVLRIG LLLTGGTLIF LVMWLDDVVE LPWFPKFAAQ
IGAALIAVGP YLWDQRRYPD TLGLLTEARG ILLTAFNAPF VGQVSLWDVS PWLAILATVF
WLGWMANTIN WSDGLDGLAA GVSLIAAFML ALHALRLDPP QTTIALLPLA LAGTCAGFLI
FNLPPARIFM GDSGAEFLGF ILGVSAIIGG AKLATVLLVL GVPILDVAWL IVARTVSGKQ
PMRGGRDHLH HRLLDGGMSP RQILALYWGL SAGFGLLGIT DISPYAKLIG LALLILIGIG
LIAYATRRVT LRSVQ
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