Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4042 |
Symbol | |
ID | 5541553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5243148 |
End bp | 5244089 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896155 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001434093 |
Protein GI | 156743964 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00822978 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGCTT CATCCGCCGG ATCGTGCCAG GGCGTCTGTT TTCCCAAGGT TGATCTGAGC ACGCATCCGT GTTATAGCCG GGCAGCGCAT TTCCGCTTCG GACGCATCCA CGTGCCGGTG GCGCCCCGTT GCAACATCCA GTGCAACTAT TGCATTCGCA AATACGCATG CCCAAACGAA AATCGTCCCG GCGTCACCAT GCGGGTCATG TCGCCCGACG AGGCGCTCCA CACCGTCCGC CACGCCATCG CCCACGACCT GCGCCTCCGC GTCCTTGGCG TGGCCGGTCC AGGCGATGCG CTGGCAAATC AGGCGACGCT CACTACGTTC GAGCGCGCGC GCGCTGAGTT TCCGCACCTG ATCCGCTGCC TCTCGACCAA CGGCTTGCTG CTGCCGGATC AGATCGACGC CATCGAGCGG GCCGGGATCA CCACGCTGAC GATCACGATC AATGCGGTCG ATCCGGCAAT TGGCAAGCAG ATATACGCCC ATGTGCGCTA TCGGGGCAAA ACCTACCGCG GGCGCGAGGC AAGCACACTG CTCCTGCACA ATCAGTTGAT CGGACTGCGC GAAGCGGCAC TGCGCGGTAT AGTGGTTAAG GTGAACTCAG TGCTCATTCC CGGTATCAAC GATCATCACC TGATCGACGT CGCGTGCGTC GTCAAAGATC ACGGCGCCTC CATCATGAAC ATCATCCCGC TCATACCCCT GGCGAAGTTT GCGCACCTGC CGGAACCCTC ACCCGAACTG CTCAACCGGG TGCGCGACGA GTGCGCGACC GTCATCGAAC AGTTTCGCCA CTGCCAGCGA TGCCGCGCCG ATGCCATCGG CGTTCCCGGC GAGGAGGGGT GCGGTACGGG CGAACGAGTC TGTATTCCCA GATTTTTGGC ACAGCGGAAG GAGCACACCC ATGCAGTTCA AGTGCAATCA GACCCTGCCT GA
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Protein sequence | MDASSAGSCQ GVCFPKVDLS THPCYSRAAH FRFGRIHVPV APRCNIQCNY CIRKYACPNE NRPGVTMRVM SPDEALHTVR HAIAHDLRLR VLGVAGPGDA LANQATLTTF ERARAEFPHL IRCLSTNGLL LPDQIDAIER AGITTLTITI NAVDPAIGKQ IYAHVRYRGK TYRGREASTL LLHNQLIGLR EAALRGIVVK VNSVLIPGIN DHHLIDVACV VKDHGASIMN IIPLIPLAKF AHLPEPSPEL LNRVRDECAT VIEQFRHCQR CRADAIGVPG EEGCGTGERV CIPRFLAQRK EHTHAVQVQS DPA
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