| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4029 |
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| Symbol | |
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| ID | 5541539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5227316 |
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| End bp | 5229421 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896141 |
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| Product | elongation factor G |
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| Protein accession | YP_001434080 |
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| Protein GI | 156743951 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00578031 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000445234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTCGTG AAGTGCCATT AGAGCGGATA CGAAATATTG GTATCATTGC CCATATCGAT
GCGGGGAAGA CGACGACGAC CGAACGCATT CTGTTCTATA CCGGTCGAAC GTACAAACTT
GGCGAGGTGC ATGAAGGCAC CGCAGTGATG GACTGGATGG AACAGGAGCG TGAGCGCGGC
ATTACGATCA CCGCTGCTGC CACTACTGCT GAGTGGACGG TCGAAGGAAC GCCGTATCGC
ATCAATATCA TCGACACACC TGGTCACGTC GACTTTACGG CGGAGGTCGA GCGGTCGCTG
CGCGTGCTCG ATGGCGGCGT GGTGGTGTTC GATGCCGTCG CCGGGGTCGA GCCGCAATCG
GAGACGGTGT GGCGGCAGGC GGATAAGTAC CACGTGCCGC GGATCTGCTT CGTCAACAAG
ATGGACCGGA TCGGCGCCAA CTTTATGCGC ACGGTGGACA TGATTCGAGA GCGCCTTGGC
GCAAAACCGG TGCCGGTTCA GTTCCCGATT GGCGCAGAGG ATCGCTTTCG CGGCATCGTA
GACTTGATCA CCAACAAGGC GGTCATCTAC GTCGATGATC AGGGCAAACG CGAGGAACTG
GAGGCGATCC CGGCAGATGT CGCCGACGAG GTGGAACGCC TGCGCAATGA GATGATCGAA
GCAATCGCTG AAACCGATGA TGAGTTGACG CTCCTCTATC TCGAGGGCGA AGAACTCAGC
GTCGAAGAAC TGCGCCGGGC ATTGCGCAAG GCGACGATCC AGGGCAAACT GGTGCCGGTG
CTGTGTGGCG CTGCCCTGCG CAACAAAGGG GTGCAGCGCC TGCTCGATGC GGTTGTCTAC
TATTTGCCGT CGCCGGTCGA TATTCCGCCG GTGCGCGGGA CGCGCCCAGG TCAGATTGCC
GGCGACGATG GCGTTGAGAT GATCACGCGC CCGACATCGG AAGACGCGCC GTTTACCGGT
CTGGTGTTCA AGATCGTCTC CGACCCGTTC GTCGGGAAAC TTGCGTACTT CCGGGTCTAT
TCCGGCAAGT TGGAGACCGG CTCCTACGTG CTCAATTCGA CGCGCAATCA GCGTGAACGT
ATCGGGCGCC TGCTCCAAAT GCATGCCAAC CATCGCGAGG AGATCAAGGA GGTCTACGCC
GGCGATATCG CTGCGATGGT CGGACCCAAG CAAAGCTATA CCGGCGATAC GATCTGCGAC
CCGAATGATC CGATTGTGCT GGAAAGCATC CGTTTCCCGG AGCCGGTCAT TCAACTGGCG
ATCGAACCCA AGACAAAGGC CGATCAGGAT AAACTGGCGG TCGCGCTCGG CAAACTGGCG
GAGGAAGACC CGACATTCCG TGTCTTCACC GACCCGGAGA CCGGACAGAC GATCATCGCC
GGCATGGGTG AGCTTCACCT TGAGGTGATT GTCGACCGCA TGCGCCGCGA GTATAAGGTC
GAAGCCAACC AGGGCAAGCC GCAGGTGGCG TATCGCGAGT CGATCACGGT TCCGGCGGAT
GTGGACAGTA AGTTCGTGCG GCAGAGCGGC GGCAAAGGTC AGTATGGCCA CGTTAAGTTG
CAGGTCGAAC CGCTCGAACG AGGGAAGGGG TTCGAGTTCG TCAACGGTAT CGTCGGCGGC
GTCATCCCAC GCGAGTATAT CCCGGCGGTC GAGGCAGGCG TCAAGGAAGC GATGGCAAGC
GGCGTGATCG CCGGCTACCC GGTCGTCGAT ATCAAAGTCA CGCTCTACGA TGGCTCGTAC
CACGAGGTTG ACTCATCAGA AATGGCATTC AAGATCGCCG CCTCGATGGG GCTGAAGGAA
GCGGTGCGTA AAGGACGTCC GATCCTGCTC GAACCGGTAA TGAAGGTCGA AATTGTGACG
CCGGAAGATT TTCTCGGCGC CGTTCTTGGC GATATCAACT CGCGCCGCGG TCACGTCGAG
GGCATGGAGG CGCGCGGCAA TGCGCAGGTT ATTCGGGCAT ACGTCCCGCT GGCGTCCATG
TTCGGCTATA CGACCGACCT GCGATCGGCA ACGCAGGGGC GCGCTACGTC GTCGATGGAG
TTCGCTTATT ACCAACCGCT GCCGGATGCT CTGGCAAAGG AGATCATCGA AAAACGGCGC
GGCTAG
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| Protein sequence | MPREVPLERI RNIGIIAHID AGKTTTTERI LFYTGRTYKL GEVHEGTAVM DWMEQERERG
ITITAAATTA EWTVEGTPYR INIIDTPGHV DFTAEVERSL RVLDGGVVVF DAVAGVEPQS
ETVWRQADKY HVPRICFVNK MDRIGANFMR TVDMIRERLG AKPVPVQFPI GAEDRFRGIV
DLITNKAVIY VDDQGKREEL EAIPADVADE VERLRNEMIE AIAETDDELT LLYLEGEELS
VEELRRALRK ATIQGKLVPV LCGAALRNKG VQRLLDAVVY YLPSPVDIPP VRGTRPGQIA
GDDGVEMITR PTSEDAPFTG LVFKIVSDPF VGKLAYFRVY SGKLETGSYV LNSTRNQRER
IGRLLQMHAN HREEIKEVYA GDIAAMVGPK QSYTGDTICD PNDPIVLESI RFPEPVIQLA
IEPKTKADQD KLAVALGKLA EEDPTFRVFT DPETGQTIIA GMGELHLEVI VDRMRREYKV
EANQGKPQVA YRESITVPAD VDSKFVRQSG GKGQYGHVKL QVEPLERGKG FEFVNGIVGG
VIPREYIPAV EAGVKEAMAS GVIAGYPVVD IKVTLYDGSY HEVDSSEMAF KIAASMGLKE
AVRKGRPILL EPVMKVEIVT PEDFLGAVLG DINSRRGHVE GMEARGNAQV IRAYVPLASM
FGYTTDLRSA TQGRATSSME FAYYQPLPDA LAKEIIEKRR G
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