Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4004 |
Symbol | infA |
ID | 5541514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5213843 |
End bp | 5214064 |
Gene Length | 222 bp |
Protein Length | 73 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640896116 |
Product | translation initiation factor IF-1 |
Protein accession | YP_001434055 |
Protein GI | 156743926 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000265509 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000014317 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAAAA AAAAAGATGT CATCGAGATG GAAGGAACCA TCACTGAACC ACTGCCAAAT GCCATGTTTC GTGTGAAACT CGAAAATGGT CACGAGGTGC TGGCTCATAT TTCGGGGCGT ATGCGGATGA ACTACATTCG CATTTTGAAA GGGGACCGGG TGCTGGTGGA GCTGTCGCCC TATGATCTGA CGCGCGGGCG GATTACGTAT CGTTACAAGT AA
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Protein sequence | MSKKKDVIEM EGTITEPLPN AMFRVKLENG HEVLAHISGR MRMNYIRILK GDRVLVELSP YDLTRGRITY RYK
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