| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4002 |
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| Symbol | rpsM |
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| ID | 5541512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5213143 |
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| End bp | 5213526 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896114 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001434053 |
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| Protein GI | 156743924 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000504702 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000204187 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGCA TTGCAGGGGT TGACCTCCCG CGCAACAAAA CCATCGAAAT CGCTATTACC
TATATCTTCG GCATTGGACG CTCAAATGGG GCTGATGTGC TGCGCAAAGC GAACGTCAAC
CCTGCGACGC GGGTGCGCGA TCTGACTGAG GAAGAGGTTT CGCGCATTCG TGAAATCGTC
GAGCGTGAGT ATCGCGTCGA AGGCGATTTG CGACGCGAAA TTCAAATGAA TATCAAGCGC
TTGATGGATA TCGGGTGCTA CCGCGGTCTG CGCCATCGTA AGGGGTTGCC GGTGCGCGGT
CAGCGCACGC GGACCAATGC GCGCACCCGC CGCGGTCGCC GCGGACAGGC CATCGGCATC
AAGAAGAAGA CCTTGAAGAA GTAA
|
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| Protein sequence | MARIAGVDLP RNKTIEIAIT YIFGIGRSNG ADVLRKANVN PATRVRDLTE EEVSRIREIV
EREYRVEGDL RREIQMNIKR LMDIGCYRGL RHRKGLPVRG QRTRTNARTR RGRRGQAIGI
KKKTLKK
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