Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3950 |
Symbol | |
ID | 5541456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5155646 |
End bp | 5156839 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896058 |
Product | putative esterase |
Protein accession | YP_001434001 |
Protein GI | 156743872 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2382] Enterochelin esterase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.449201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGTA GCGCTCTGTT CCGTCCGACG TTTACCGATC TGCGCGCTGA GGTTGAGCGT CGCGTGTCCA ATGACGCATC ACCTGAAACA ATTACTGCGC TGATCGATGA GTTCCTGGCG GCTGGCGGCG ATATGCCAGC TCCTCTCATT GAGTACGATG GCGCTGTGAC CTGGCTGTTC CGTAGTTCCA CCGCACAATC GGTGTCGGTC GTCGGCGATG TTCTGGGCTA TCGTCTGGAT CGGACGCAGA TGACCCGGTT GCAGGGAAGC GATCTCTTTT ACCTGACGAT GCATCTGCCG CTCGATGCGC ACATTGCCTA TGCGTTTGCG GTCGATGCAT CCGAGACTGC GGCGCGCGCA CGCTGGCTCG ACCGGTGCGT GCCCGATCCG CTGAATCCGC AGCGAATCGT GATGACCAAC CCGCTACGGA TGATGTCGGT GCTTGAGATG CCTGGCGCTG CGTCGCTCAT CGCCGGGTTC GATACGCTCG CCGAAACGCC GATGTTTGCC GGCATCCATG GGCTATGGAG CGCCGCCCTG GGTTGCTGGC GGCGTCTGTG GGTGTACCTG CCTCCGGAGT ACGATCCCGC TGCACGGCGC TATCCGACGC TCTATCTGCT CGATGGCGAG GCGTATCTGC TCTCGGCAGA GCTGCCCCTG ATGCTCGATC TCATGATCGA CCAGAACGAG ATGTCGCCGG TTATTGCTGT GTTGATCGAG CCGCCGCCGG TGCGTGTGTC GTCTGTGGTC GGGTTGCGCT TTGTCGTTGA TGATGTGGCG CCCTGGATCG ATGCCCGGTA CGCCACCTCC CACGATCCGC TCGACCGGAT TATTGGCGGC GCCGATGAGT ATGCAACTCG CGCATTGATG ATTGCACTCC AACGCCCCGA CCTCTTTGGC GGCGCCCTGG CGCAATCGCC GCAGACGCCA CCAATCCGGC GGGTTGCCGC GCTGCTGGAT CGTCGTGATG TGCGCAGAGA GGATGCCCCG CGTTGTTATG TGGATGTCGG GCGATATGAT GATCCCGCAG CCGTTGAGTC GACGCAGGCG TTGTGCAGCG TCCTGGTAAG CGGCGGCGCG GTGGTTTCGT ACCAGGAGTT TGCCGGCGGG CGCAGTTTCG CCGGCTGGCG GGTTACGTTG CCTGATGCGC TTCGCTTTCA CTTTGGAACG TCGTCGCTCG CCAGTTTGGC GTAA
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Protein sequence | MSGSALFRPT FTDLRAEVER RVSNDASPET ITALIDEFLA AGGDMPAPLI EYDGAVTWLF RSSTAQSVSV VGDVLGYRLD RTQMTRLQGS DLFYLTMHLP LDAHIAYAFA VDASETAARA RWLDRCVPDP LNPQRIVMTN PLRMMSVLEM PGAASLIAGF DTLAETPMFA GIHGLWSAAL GCWRRLWVYL PPEYDPAARR YPTLYLLDGE AYLLSAELPL MLDLMIDQNE MSPVIAVLIE PPPVRVSSVV GLRFVVDDVA PWIDARYATS HDPLDRIIGG ADEYATRALM IALQRPDLFG GALAQSPQTP PIRRVAALLD RRDVRREDAP RCYVDVGRYD DPAAVESTQA LCSVLVSGGA VVSYQEFAGG RSFAGWRVTL PDALRFHFGT SSLASLA
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