Gene Rcas_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3950 
Symbol 
ID5541456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5155646 
End bp5156839 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content62% 
IMG OID640896058 
Productputative esterase 
Protein accessionYP_001434001 
Protein GI156743872 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2382] Enterochelin esterase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.449201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTA GCGCTCTGTT CCGTCCGACG TTTACCGATC TGCGCGCTGA GGTTGAGCGT 
CGCGTGTCCA ATGACGCATC ACCTGAAACA ATTACTGCGC TGATCGATGA GTTCCTGGCG
GCTGGCGGCG ATATGCCAGC TCCTCTCATT GAGTACGATG GCGCTGTGAC CTGGCTGTTC
CGTAGTTCCA CCGCACAATC GGTGTCGGTC GTCGGCGATG TTCTGGGCTA TCGTCTGGAT
CGGACGCAGA TGACCCGGTT GCAGGGAAGC GATCTCTTTT ACCTGACGAT GCATCTGCCG
CTCGATGCGC ACATTGCCTA TGCGTTTGCG GTCGATGCAT CCGAGACTGC GGCGCGCGCA
CGCTGGCTCG ACCGGTGCGT GCCCGATCCG CTGAATCCGC AGCGAATCGT GATGACCAAC
CCGCTACGGA TGATGTCGGT GCTTGAGATG CCTGGCGCTG CGTCGCTCAT CGCCGGGTTC
GATACGCTCG CCGAAACGCC GATGTTTGCC GGCATCCATG GGCTATGGAG CGCCGCCCTG
GGTTGCTGGC GGCGTCTGTG GGTGTACCTG CCTCCGGAGT ACGATCCCGC TGCACGGCGC
TATCCGACGC TCTATCTGCT CGATGGCGAG GCGTATCTGC TCTCGGCAGA GCTGCCCCTG
ATGCTCGATC TCATGATCGA CCAGAACGAG ATGTCGCCGG TTATTGCTGT GTTGATCGAG
CCGCCGCCGG TGCGTGTGTC GTCTGTGGTC GGGTTGCGCT TTGTCGTTGA TGATGTGGCG
CCCTGGATCG ATGCCCGGTA CGCCACCTCC CACGATCCGC TCGACCGGAT TATTGGCGGC
GCCGATGAGT ATGCAACTCG CGCATTGATG ATTGCACTCC AACGCCCCGA CCTCTTTGGC
GGCGCCCTGG CGCAATCGCC GCAGACGCCA CCAATCCGGC GGGTTGCCGC GCTGCTGGAT
CGTCGTGATG TGCGCAGAGA GGATGCCCCG CGTTGTTATG TGGATGTCGG GCGATATGAT
GATCCCGCAG CCGTTGAGTC GACGCAGGCG TTGTGCAGCG TCCTGGTAAG CGGCGGCGCG
GTGGTTTCGT ACCAGGAGTT TGCCGGCGGG CGCAGTTTCG CCGGCTGGCG GGTTACGTTG
CCTGATGCGC TTCGCTTTCA CTTTGGAACG TCGTCGCTCG CCAGTTTGGC GTAA
 
Protein sequence
MSGSALFRPT FTDLRAEVER RVSNDASPET ITALIDEFLA AGGDMPAPLI EYDGAVTWLF 
RSSTAQSVSV VGDVLGYRLD RTQMTRLQGS DLFYLTMHLP LDAHIAYAFA VDASETAARA
RWLDRCVPDP LNPQRIVMTN PLRMMSVLEM PGAASLIAGF DTLAETPMFA GIHGLWSAAL
GCWRRLWVYL PPEYDPAARR YPTLYLLDGE AYLLSAELPL MLDLMIDQNE MSPVIAVLIE
PPPVRVSSVV GLRFVVDDVA PWIDARYATS HDPLDRIIGG ADEYATRALM IALQRPDLFG
GALAQSPQTP PIRRVAALLD RRDVRREDAP RCYVDVGRYD DPAAVESTQA LCSVLVSGGA
VVSYQEFAGG RSFAGWRVTL PDALRFHFGT SSLASLA