| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3938 |
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| Symbol | |
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| ID | 5541444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5138222 |
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| End bp | 5140036 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896046 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433989 |
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| Protein GI | 156743860 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCGA CATTGCCGTT CCGCATTGAC CGCATTCTTT CCATTGTGGT GACGACAGCA
CTGCTGCTGG CGATGTTGCC GGCAGTTGCG CCGCCTGAAA CCTCGCTCGT TGTCCAGGAA
ACGTCCCGGG CAACGCTGCG TGATTCGCCC TTCGGCGTTA ACAGCCATCT GGCAACACGC
TACTGGGACC CTGCATCAAT GCATGTGCCG GCCGACGTCG TCGCGCGCCT GGGGGTCGGT
TGGGCGCGTG AGGATTTCCA CTGGTTTCGA ATCCAGCCAA CGCCCGATGC CCCTTACGAC
TGGACATTCA CCGATGAAGC AGTGCGCGCG CTCAATCGAC GTGGAGTGAA CATTCTGGGA
GTCATCGGGC ATCCGCCGGG ATGGGCAACC CCGTTCCCCG GCGACATTCC GCACGGCGTG
TCGTTCTACG CTCCCGATCC GCAACGGTTT GCCGCCTTTG CCGCCGCCGT TGCGCAGCGC
TACCGCAACT ATATCTCCCA TTGGGAAATC TGGAATGAGC CGGACAATCC GTTGTTCTGG
AAGCCTGCCC CTGATCCTGT CGCCTATGCC ACACTCCTGC GCCTCACTTC CGCCGCGATC
CGATCGGTCC ATCCAGAGGC GACCATTCTG ATCGGCGGGG TCTATTCGTT CGAGCCATCG
TTTCTGCGGC AGGTCGCCGA AGCAGGCGCA TGGCAGAGTT TCGACATTCT TGCCATCCAT
CCGTATGTCA GCCCAAGCGC GCCAGAGATC GGCAACCTGG TCGCCGGCGT CGAAGCGGCG
CGTTCCGTCG CCGAGCAGTA CGGCGCGCGC CCGATCTGGG TCACTGAGAT TGGGTGGTCG
AGCGGGCGCG GCGACCGCGA CCCCGTTGGA CTGGTGAATG AGCAGGATCA GGCCAATTTT
CTGGTGCGCT CAATGTTATT GCTCTGGAGC GCCGGTGTTG AGAAGGTTTT CTGGTATACG
CTCAAGGACG ACCCCGGCAA CCCCTATGGT CTGGTAGGGA CTGGCGTTGG TTATTTCGAC
TATAGCCGCC TGAAGCCGTC GTTTACCGCA TATCGGGTGA TGGTGGAGAA TCTAGCGGGC
GCCGACCTGG TGGTCGTGCG TGATCTGTTC AACCGAACTA CCGTGCTCGA CTTCGAGCAG
TTTGGTTCAT GGCGGCGCGG CGATCAGGCG TATGGCGATC TGACGCCGAC CGGTGAGCGC
GCGCGCAGCG GGCGCGGCGC GGCACAGTTG CGCTACACAT TCGCTTCGCG CACCAATGAG
TTCATCGTCT TTCGGCGCGA ACGCCCGGCG CCCATTCCCG ACGGCGCTTA CGCGCTGGGG
CTGTGGGTGT ACGGCGACGG TTCAGGAAAC ACGCTCAAAG TCTGGGTGCG CGATGCAGAA
GGGGAAGTGT TGCAGTTTAC CCTGGGTGCA ATCGGACCGC CGGGATGGCG CATTCTGGAG
GCGCCAATCG TGGGCGTTGC GCCGGAATGG GACCGGATCA GCGGCAATGG CAACGGGCGG
GTCGACTTTC CGGCTCGCCT CGACGCGATT GTGCTCGACG ATGCACCGGA TGACCTTGCC
AGCGGAGGGA CCATCTATCT CGACGACCTG TTCGCCGTCA GCGGACCGGA AGCGTATGAC
GCACAGTTTC AGCGCGGCGA TACAACCATC GACGTGTTGT GGGCGCCGGC GCCGGTACGC
GCCAGCATCC GCACCGGCGC ATCGACCGCC GCCCTGATCA CACGCGATGG CGGCTCATCG
ACGATTATCG CCAGCGAGGG TCGCCTGGTC ATCGACCTCG GACCGGCGCC GGTGTACGTG
GTTCATCGGC GATGA
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| Protein sequence | MRSTLPFRID RILSIVVTTA LLLAMLPAVA PPETSLVVQE TSRATLRDSP FGVNSHLATR
YWDPASMHVP ADVVARLGVG WAREDFHWFR IQPTPDAPYD WTFTDEAVRA LNRRGVNILG
VIGHPPGWAT PFPGDIPHGV SFYAPDPQRF AAFAAAVAQR YRNYISHWEI WNEPDNPLFW
KPAPDPVAYA TLLRLTSAAI RSVHPEATIL IGGVYSFEPS FLRQVAEAGA WQSFDILAIH
PYVSPSAPEI GNLVAGVEAA RSVAEQYGAR PIWVTEIGWS SGRGDRDPVG LVNEQDQANF
LVRSMLLLWS AGVEKVFWYT LKDDPGNPYG LVGTGVGYFD YSRLKPSFTA YRVMVENLAG
ADLVVVRDLF NRTTVLDFEQ FGSWRRGDQA YGDLTPTGER ARSGRGAAQL RYTFASRTNE
FIVFRRERPA PIPDGAYALG LWVYGDGSGN TLKVWVRDAE GEVLQFTLGA IGPPGWRILE
APIVGVAPEW DRISGNGNGR VDFPARLDAI VLDDAPDDLA SGGTIYLDDL FAVSGPEAYD
AQFQRGDTTI DVLWAPAPVR ASIRTGASTA ALITRDGGSS TIIASEGRLV IDLGPAPVYV
VHRR
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