| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3931 |
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| Symbol | |
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| ID | 5541437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5128266 |
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| End bp | 5129984 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896039 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001433982 |
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| Protein GI | 156743853 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.420242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0571898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTC CCCGGTTATC CGCGCGAAAC AAACGCTGGC TCATCCACGA AACGCCACGC
GAGTTTATTG CTGCCTGGCG CCAGTTTCCG CCGCTGATCG CTGCGGTGCT CTATCAGCGT
GGGCTGCGGG ATGAGAGCGC CATCGGGGAG TTCTTCGCTT CTGATTATCG GCTGCACGAT
CCTTTCAGCC TGCGCGGTAT GGAAGCAGCA GTGCAACGGA TCGTCGCGGC TATCCAGAAC
CATGAACCGA TGGCGGTCTA TGGCGATTAT GATACCGATG GCGTAACGGC TGTGACGCTG
CTGGTGCAGG TCATCCGCGC TATGGGCGGA ATGATCCAGC CCTATGTGCC GCACCGTATT
CGTGAAGGGT ATGGTTTGAA CATCGCGGCA ATCGATGCGC TGGTGCGTGA AGGGGTTCGC
CTGCTGATCA CGGTCGATTG TGGCATCAGC AATCTGCGTG AAGCGGAGCA CGCGCGCGCT
GCCGGGCTTG ATCTGATCAT CACCGATCAC CATGCCCCAC CGGCGCGCCT CCCATATGCC
CTGGCAATCG TTAATCCCAA ACAACCGGGG TGCCCGTATC CATTCAAACA TCTGGTCGGC
GTGGGGATCG CCTACCAACT GGCGCGCGCG TTGGTGCGCC GCGGCTTGCG CTCGACGCTC
CAGAAAGATG ATCTGCTCGA TGTCGTCGCC ATTGGTACTG TGACCGATAT GGGACCGCTG
ATCGGCGAGA ATCGCGTGCT GGTGACGCAT GGCTTGAAGG CGATCAATGC CGCGCAACGT
CCCGGAGTGC GCGCGCTGAT CGAAGCCGCC GGTTTGACGC CGGGGAAAGT GACATCGACC
GACATCAGTT TTGGGCTTGG ACCGCGCCTG AATGCGTCGG GACGGATCGA TAACGCGCGA
TTGAGCTACG AACTGTTGCT TGCCGAAGAA CTCGCAATGG CGCAACGCCT GGCGCGCGAA
TTGAATGCGC AGAATCGTCA ACGCCAGGAG TTGTCGAAGA GTGTCCAGGA GCAGGCAAGT
GCGCAAATCA GGGCGTTGGG CAAGCATCAG CAGCGGATTA TCGTGCTCGA CGACGCCGGG
TATCCGTCCG GTGTGGTGGG GTTGGTTGCT GCCCATCTGG TCGAGGAGTA TGGGCGTCCG
ACCGTTCTGA TCGAACGCGG TGAGATGTGG TCGCGCGGCT CAGCGCGTTC AGTTCCCGGT
TTCAGCATCA TCGAAGCGCT GACCGCCTGC GCCGATCTGT TTGAACGCTT TGGCGGGCAT
GCTGAGGCTG CCGGATTCAC CATCGCCACC GACCGCCTGC CGGAGCTTGA AGATCGTCTG
GTGCGGTATG CCGATCAGCG CCTGCCTGAC GATCTGCTGA TCCCCAGCCT TCGGATCGAT
GCCGGGGTTC CGCTTGGCGA GTTGTCATAC GATCTGCTGA ATGAACTGAA GAAGTTGGAA
CCGTTCGGTC AGGGTAATCC ACAACCCGTG CTGATGAGCA GCCGGGTGCA GGTGATCGGC
GCGTGGACGC GCGGGAGTGA GGGGCAGCAC CTGAAATTGC GCCTGACCGA CGCTGGCGGC
AGGGGTCCTT TCAACGCCAT TGCGTTTCGC TTGGGCCACC TGGCGCGCTA TTTCGAGCAA
CCACGCTGGA TCGATGTGGT ATACACTCTC GAAGTCGATG AGTGGAATGG CAGCGATGCG
TTGCAGTTGA ATGTCAAGGA TTTCCGCAGC GCACGATGA
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| Protein sequence | MSTPRLSARN KRWLIHETPR EFIAAWRQFP PLIAAVLYQR GLRDESAIGE FFASDYRLHD
PFSLRGMEAA VQRIVAAIQN HEPMAVYGDY DTDGVTAVTL LVQVIRAMGG MIQPYVPHRI
REGYGLNIAA IDALVREGVR LLITVDCGIS NLREAEHARA AGLDLIITDH HAPPARLPYA
LAIVNPKQPG CPYPFKHLVG VGIAYQLARA LVRRGLRSTL QKDDLLDVVA IGTVTDMGPL
IGENRVLVTH GLKAINAAQR PGVRALIEAA GLTPGKVTST DISFGLGPRL NASGRIDNAR
LSYELLLAEE LAMAQRLARE LNAQNRQRQE LSKSVQEQAS AQIRALGKHQ QRIIVLDDAG
YPSGVVGLVA AHLVEEYGRP TVLIERGEMW SRGSARSVPG FSIIEALTAC ADLFERFGGH
AEAAGFTIAT DRLPELEDRL VRYADQRLPD DLLIPSLRID AGVPLGELSY DLLNELKKLE
PFGQGNPQPV LMSSRVQVIG AWTRGSEGQH LKLRLTDAGG RGPFNAIAFR LGHLARYFEQ
PRWIDVVYTL EVDEWNGSDA LQLNVKDFRS AR
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