| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3929 |
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| Symbol | |
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| ID | 5541435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5126602 |
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| End bp | 5127312 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896037 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001433980 |
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| Protein GI | 156743851 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.709304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.124781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGC GCGCACGCAT TCCCCGGCAT ATTGCTATCA TCATGGATGG GAATGGGCGC
TGGGCGCGCC AGCGCCATTT GCCGCGTCTC GCCGGTCATC GCGCCGGTAC GGAAAATATC
CGCCGGATTG TGACCGAGTG TGCAGAGCAG GGGGTGCAGT ACCTGACGCT CTATGCGTTT
TCGACCGAAA ACTGGTCGCG ACCGTCGGCT GAAGTCGATG GCTTGATGCG CATTTTGAGC
GACTTTATTG ACCGCGAGAC GATCAATTTG CATCGTGAGG GTGCGCGCCT GCGCCACCTC
GGGCGCCTCG ATAATATTTC TGCCGAGTTG CGGCAGAAGA TTCTTGATGC GATTGAACTG
ACGCGCCATA ATACCCGGAT TACGCTGGCA GTCGCGTTCA ATTACGGCGG ACGCGCCGAT
ATTGTCGATG CAGTGCGCGA GTTGATTGCG CTTGGCGTCA ACGCTGATGA CGTGACGGAA
AAGATGATCA GTGATCACCT CTCGACCCGT GGTATGCCCG ATCCCGATCT GATTATTCGC
ACTAGTGGCG AATGGCGCCT CTCCAATTTT CTGATCTGGC AGGCGGCGTA TAGCGAATAC
TGGACCACGT CGGTATACTG GCCCGATTTC AGTCCTGAAC ATCTGCGTCA GGCTATTCAC
GACTATGGAC AACGCCAACG CCGCTTCGGC GGACTCTCAG AGGAATCCTA G
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| Protein sequence | MSQRARIPRH IAIIMDGNGR WARQRHLPRL AGHRAGTENI RRIVTECAEQ GVQYLTLYAF
STENWSRPSA EVDGLMRILS DFIDRETINL HREGARLRHL GRLDNISAEL RQKILDAIEL
TRHNTRITLA VAFNYGGRAD IVDAVRELIA LGVNADDVTE KMISDHLSTR GMPDPDLIIR
TSGEWRLSNF LIWQAAYSEY WTTSVYWPDF SPEHLRQAIH DYGQRQRRFG GLSEES
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