| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3925 |
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| Symbol | rpsB |
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| ID | 5541431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5123520 |
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| End bp | 5124311 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640896033 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001433976 |
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| Protein GI | 156743847 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0841532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG GAGCGCAGCG GCTCGTTTCG ATGCGCGCAT TGCTCGAATC AGGAGCGCAT
TTCGGGCATC AGACCAAGCG ATGGAACCCA AAGATGCGGC CGTACATCTT TACGGCGCGC
AACGGCATTC ACATCATCGA TCTGCAAAAG ACGATTACGG GCCTGACGGA AGCGTATCAG
TTCATCGTCG AGACGGTCGC CGCAGGCAAC AAGGTGCTAT TCGTCGGCAC CAAGAAACAG
GCGCAGGAAA CAATCGCCGA AGAAGCAACG CGCGCCGATC AATTGTATGT GATCCAGCGG
TGGCTGGGAG GGACGTTGAC CAATTTCGTG ACGATTCGCA AGCGGTTGCG CTACCTGATC
AATCTGGAAG AACAACGCGC TCGTGGTGAG TTCAACAAGT TGACGAAAGC CGAAGCGCTC
AAGCGCGACG CGGAGATCGA GAAACTGAAT AAAATCTTCG GTGGCATCAA AACGATGGAT
CGCCTGCCGG GTGCATTGTT TATCGTCGAT CCGCACAAAG AAGACCTGGC AGTCAAAGAA
GCCAACAAGG TCGGCATCCC CATCGTAGCG ATGGTCGATA CCAATTGCGA TCCCGATCTG
ATCGACTATG TCATACCGTG TAATGATGAT GCTATTCGCA GTATTCGCCT GATTGCTGCG
AAGATTGCCG ATGCCGCCAT CGAGGGGCGG AATCGGCGTG AATCGCTCCA GGCGGACGTG
GCATATAGCC AATCGCATGA TCACGCAATG GCAGAACGCA TGATCGCCGA GGAAGCCGAG
GCGGTCGAGT AA
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| Protein sequence | MTQGAQRLVS MRALLESGAH FGHQTKRWNP KMRPYIFTAR NGIHIIDLQK TITGLTEAYQ
FIVETVAAGN KVLFVGTKKQ AQETIAEEAT RADQLYVIQR WLGGTLTNFV TIRKRLRYLI
NLEEQRARGE FNKLTKAEAL KRDAEIEKLN KIFGGIKTMD RLPGALFIVD PHKEDLAVKE
ANKVGIPIVA MVDTNCDPDL IDYVIPCNDD AIRSIRLIAA KIADAAIEGR NRRESLQADV
AYSQSHDHAM AERMIAEEAE AVE
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