Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3923 |
Symbol | |
ID | 5541429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5121750 |
End bp | 5122259 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896032 |
Product | hypothetical protein |
Protein accession | YP_001433975 |
Protein GI | 156743846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.618286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0669339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGGA TGCGAGGCTA CGACGCGCCT GACCAGGAAA CGCAAGACCG GCAGATGGTG CGTCTGTTCG GCAACGTGAG GGGAGAGGAA GCCACCTTTG CTGCTGGACG CCTGTATTTC TTTCCCACCT TCTTCGACCG GCTCGGTCTA GAGGTGATCA ATCCCCACGA CCGCGTGAAG GGCGTCGGTG AGCGGGGACC GATCCTGTTC GAGTGCGCAC CAACGAGAGC GCAGGGGACC TTCACGCTTC TGGACGTTCC CCTCGGCGTC CAGGTGGACG GTGTGGAGAT TGCCGAAGAC CTTGCAGCCG TCGCCAGTGG CATCCACCGA ATGCTTGTTG AGGACGGCTT CGGTGCGAAG ACCAGCAGCG GGTTTGGCAC AGCGGAGGAG ACATTGCCGG ATGCGGGTCA ACTGGCTATC GCGGCTGACC CGCTGCAATC ACCCCAGCAG AAAACGTTCC GCTCCCTGAC TAAACTGGTG GAGCAGGCAG CAGCACAGGA TGCGCGCTAA
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Protein sequence | MRRMRGYDAP DQETQDRQMV RLFGNVRGEE ATFAAGRLYF FPTFFDRLGL EVINPHDRVK GVGERGPILF ECAPTRAQGT FTLLDVPLGV QVDGVEIAED LAAVASGIHR MLVEDGFGAK TSSGFGTAEE TLPDAGQLAI AADPLQSPQQ KTFRSLTKLV EQAAAQDAR
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