Gene Rcas_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3923 
Symbol 
ID5541429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5121750 
End bp5122259 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID640896032 
Producthypothetical protein 
Protein accessionYP_001433975 
Protein GI156743846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.618286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0669339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGA TGCGAGGCTA CGACGCGCCT GACCAGGAAA CGCAAGACCG GCAGATGGTG 
CGTCTGTTCG GCAACGTGAG GGGAGAGGAA GCCACCTTTG CTGCTGGACG CCTGTATTTC
TTTCCCACCT TCTTCGACCG GCTCGGTCTA GAGGTGATCA ATCCCCACGA CCGCGTGAAG
GGCGTCGGTG AGCGGGGACC GATCCTGTTC GAGTGCGCAC CAACGAGAGC GCAGGGGACC
TTCACGCTTC TGGACGTTCC CCTCGGCGTC CAGGTGGACG GTGTGGAGAT TGCCGAAGAC
CTTGCAGCCG TCGCCAGTGG CATCCACCGA ATGCTTGTTG AGGACGGCTT CGGTGCGAAG
ACCAGCAGCG GGTTTGGCAC AGCGGAGGAG ACATTGCCGG ATGCGGGTCA ACTGGCTATC
GCGGCTGACC CGCTGCAATC ACCCCAGCAG AAAACGTTCC GCTCCCTGAC TAAACTGGTG
GAGCAGGCAG CAGCACAGGA TGCGCGCTAA
 
Protein sequence
MRRMRGYDAP DQETQDRQMV RLFGNVRGEE ATFAAGRLYF FPTFFDRLGL EVINPHDRVK 
GVGERGPILF ECAPTRAQGT FTLLDVPLGV QVDGVEIAED LAAVASGIHR MLVEDGFGAK
TSSGFGTAEE TLPDAGQLAI AADPLQSPQQ KTFRSLTKLV EQAAAQDAR