| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3921 |
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| Symbol | |
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| ID | 5541427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5120890 |
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| End bp | 5121273 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640896030 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001433973 |
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| Protein GI | 156743844 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.063981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATC CTGAGCAGTG GCTCGCTTTT GCACGACAAG ACGCGCAGAT AGCCGATCTT
GCGATGCGAG AGGGCATATT CAACCAGGTG TGCTTCCATT CTCAACAGTG TGTCGAAAAG
TCGCTCAAGG CGCTGATTGT TCATCAAGGA CAAACTCCGC CGCGCATTCA TAAATTGACC
GATCTCCTCG CTCTAGTCAG CGCCGTGCCA TTGTCAGCAA TGGCAAGCGA GATATACCTG
CTGGATCGCT TCTACACCGT CACTCGTTAC CCGGGATTTT CTCCGCTCAC GTCGCAGACG
CTGCCAGATC AGCATGATGC AGAGGAAGCG CTCGATATCG CACGTAAGGT TCTGGACATT
GTGACGAATA TCGTGACATC TTGA
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| Protein sequence | MSDPEQWLAF ARQDAQIADL AMREGIFNQV CFHSQQCVEK SLKALIVHQG QTPPRIHKLT
DLLALVSAVP LSAMASEIYL LDRFYTVTRY PGFSPLTSQT LPDQHDAEEA LDIARKVLDI
VTNIVTS
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