| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3914 |
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| Symbol | |
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| ID | 5541420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5115252 |
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| End bp | 5116085 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896024 |
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| Product | D-mannonate oxidoreductase |
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| Protein accession | YP_001433967 |
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| Protein GI | 156743838 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.374414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.041983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC CATTTCTTCG TTCATTGTTC GGTCTGGAAG GGAAGGTTGC CGTGGTCACC
GGCGGCAGCG GCGCCCTTGG CGCTGCGATG GCGCAGGGAC TGGCACGCGC TGGCGCGCGG
ATCGCCATTC TTGCCCGACG CATCGAACCG GCAAACGCAG TCGCCGCCGC TCTCGCAGAC
GCTGGCAGCG ATGCGTTTGC GCTCAGCGCC GATGTGCGCG ACCGGACGCA GATCGAACAC
GCCTGTAACA CAATTCTTGA ACGCTGGGAA CGGGTCGATA TTCTGGTGAA TGCCGCTGGC
GGGAATATGC CGGGCGCAAC GCTTGCTCCC GATGCTGCGC TGCGCGATCT TGACCCCGAC
GCCTTTCGCA CCGTCGTCGA TCTGAATCTG ATCGGCACAC TGCTGCCATC GCTCATCTTT
GGCGCAGCCA TGATCGCAGC CGACAGGCAG GGCGTGATTG TCAACATCTC CTCCATGGCA
GCGCAACGTC CACTGACTCG CATCGCCGGT TATAGCGCCG CCAAAGCCGC TGTGGACAAC
CTCACACGCT GGATGGCGGT CGAACTGACG CGGCGGTATG GTCCGGGATT GCGGGTCAAC
GCAATTGCGC CCGGATTCTT CATCGGCGAG CAGAACCGGT CGTTGTTACT CAATCCCGAC
GGATCGCCGA CAGCACGTGG TGCGAGCGTG ATTGCGCACA CACCTGCCGG ACGCTTCGGC
GTTCCGGATG ATCTCATCGC CACGCTGATC TGGCTCTGCG GACCTGGCGC CGCTTTCGTC
AACGGCGTCG TCGTCCCGGT GGACGGCGGA TTCTCTGCGT GGAGCGGCGT GTAA
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| Protein sequence | MSEPFLRSLF GLEGKVAVVT GGSGALGAAM AQGLARAGAR IAILARRIEP ANAVAAALAD
AGSDAFALSA DVRDRTQIEH ACNTILERWE RVDILVNAAG GNMPGATLAP DAALRDLDPD
AFRTVVDLNL IGTLLPSLIF GAAMIAADRQ GVIVNISSMA AQRPLTRIAG YSAAKAAVDN
LTRWMAVELT RRYGPGLRVN AIAPGFFIGE QNRSLLLNPD GSPTARGASV IAHTPAGRFG
VPDDLIATLI WLCGPGAAFV NGVVVPVDGG FSAWSGV
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