| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3858 |
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| Symbol | |
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| ID | 5541362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5041587 |
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| End bp | 5042660 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895968 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001433913 |
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| Protein GI | 156743784 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTACT CATATCTGCA AACCGGCGAT CCTGGAGATC TTGAGGAGGG CGCCGAACTG
CTTGAGCGCC TGCAAAGGAT GGTGGCTCAG CTGCGCACGT CGGACCATAT CTACGGCGAT
TTCCAGGAAG AAGTCGCCGA GCAGCACATA CCGGTTGTGG ATCAGGGCAG GGCGCTTCTG
CAAGCAGTAC AGGACCTGCA CCATCGGCTG TCGTTCGGGA TCGATACGCC GACCGATGCA
CAGCGTGAAG CGTTTTATCA GGAGATCGAA CGAATCGAAG AGCAGCGTGA GACATTCACG
AAACAAGCGA ATGCGCATCT TGCAGGCATC CGCACTGTTG CGCAGCAGCA TATTGAAGGC
GATGTCAGGC TCACCTTCGT TGGCATCGCC ATTGCACTGG CAGCGATGGT CGCATTGACC
ATAGGCGTGC TCTGGTTGAT TGAGCGACAT ATTGTGCGTC CGCTACGCTC GATCACCAAC
GCGGCAAGCC GCCTTGCGGA GGGACGTCTG GATGGCGAGT TGGCAATTAC GAGCAACGAC
GAGATCGGCG TGCTGCAACA GACGTTCAAC CGCATGGCAG CGACGATCCG GCGGCAAACC
GGCGATCTTG AAATACACTA CCGGCAGGTG ACACAGGCGC GTGACGCGCT CGAAGCGGCA
CACAGGCAGG CGGTCGAACA ACTGGCGATT ATTCAGCGGC AGCAGGAAGC CATTCGCAAA
CTGAGCGTTC CGGTGCTGCC GGTGAGCCGT GATACCCCGG TGATGCCGCT GGTCGGCGCG
CTCGACAGCG CCCGCCTGAT CCAGGTGCAG GAGCAGGCGC TGGAACGGCT TGCAGCAACC
CGCGCTCGTC GCCTGTTGCT CGACATCACC GGTGTGCCGA TTGTAGACAG TCATGTGGCG
CAGGGGCTGA TTCGCGTCGT TCAGGCGGCG CATCTTCTCG GTGCAGAGGT GATGTTGATC
GGCATTCGTC CTGAAGTGGC GCAGTCCATT GTTGGTTTAG GCATCAGCCT GAGCAATATT
CGAACCTGTA GCGATTTGCA GAGCGCACTG GCGCAAAAAG GAGGACGCTT GTGA
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| Protein sequence | MSYSYLQTGD PGDLEEGAEL LERLQRMVAQ LRTSDHIYGD FQEEVAEQHI PVVDQGRALL
QAVQDLHHRL SFGIDTPTDA QREAFYQEIE RIEEQRETFT KQANAHLAGI RTVAQQHIEG
DVRLTFVGIA IALAAMVALT IGVLWLIERH IVRPLRSITN AASRLAEGRL DGELAITSND
EIGVLQQTFN RMAATIRRQT GDLEIHYRQV TQARDALEAA HRQAVEQLAI IQRQQEAIRK
LSVPVLPVSR DTPVMPLVGA LDSARLIQVQ EQALERLAAT RARRLLLDIT GVPIVDSHVA
QGLIRVVQAA HLLGAEVMLI GIRPEVAQSI VGLGISLSNI RTCSDLQSAL AQKGGRL
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