Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3798 |
Symbol | |
ID | 5541300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4969544 |
End bp | 4970647 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895908 |
Product | NHL repeat-containing protein |
Protein accession | YP_001433855 |
Protein GI | 156743726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.88272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGCC CACTCGTCTG GATCGGCGCG CGTTCGCCTG GTGCATTGAC GCTTCCCCCT GCCGACCCGA CGCCGTCGCA GTTGTACGCA CCACGTGGCG TCTATCTCGA TGATCAGACG CTGATTGTCG CGGATTCCGG CAACCATCGC GTGCTCATCT GGCATCGCAT CCCTGATCGG GACGGACAGC CGGCTGATGT GGTGCTGGGA CAACCCGATT TCTACAGCGA GGGACCGCAG GCTGCCGGGC GCGGCTCGCG GCACGGGATG CACCTGCCGA CCGGTGTGAT GGTGATCGAT GGACGGTTGT GCGTCGCCGA TTCGTGGAAC CACCGCATTC TGGTGTGGAA TCGCGTTCCT GAGACCTCGA ACGCTCCGCC GGATAGGGTC ATCGGGCAGG CGGACCTGGA CGAATGCGAG CCGAATCGTG GCGGCGGCGT CACAGGGTGT GGATTCTATT GGCCCTACGG AATCGGATGG GTTGCCGGTC GTTTTTACGT CGCCGATACC GGCAACCGCC GCGTCCTCAG TTGGAACAGT ATTCCTGAAG ACAGACAGCC GCCCGACCTG GTGCTGGGTC AGAACGACGA GTGCAGCCAT GCCGAAAATC GTGGCGAAGG GCCGTCGCCA TGTTCGTTTC GCTGGCCCCA CGCGATTGCC GGCAATGGCA CAACCCTGTA TGTCGCCGAT GCCGGCAACC ACCGTGTGCT CGGCTGGACG CCAATCCCCG CGCGCGATAC ACCGGCGTGC CTGGCGCTCG GTCAACGCGA CTTTCAGAGC GCGTGGGAGA TGCCCCACAC GCCACCGGGA CCTTCCGCAC TCCGCTTCCC GTATGCGGTC GCGTGCGCAT CCGGCAGGCT GATCGTCGCT GATACTGCCA ATAATCGGGT GCTGATGTGG CACACGTTGC CGCGTGCAGG CGTGTTTCTG CCCGCCGATA TGGTCATCGG GCAGCCGGAT TTTGCCGGCA ACGGCGAAAA TCGCTGGCAG GCGGTCGAGC GCGATACCCT CTGCTGGCCC TATGGTATAT CCTGTCACAA CCATCGTTTG GCGATTGCCG ATTCGGGCAA TAATCGTGTT ATCATATGGG ATATCAGCGT CTGA
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Protein sequence | MVRPLVWIGA RSPGALTLPP ADPTPSQLYA PRGVYLDDQT LIVADSGNHR VLIWHRIPDR DGQPADVVLG QPDFYSEGPQ AAGRGSRHGM HLPTGVMVID GRLCVADSWN HRILVWNRVP ETSNAPPDRV IGQADLDECE PNRGGGVTGC GFYWPYGIGW VAGRFYVADT GNRRVLSWNS IPEDRQPPDL VLGQNDECSH AENRGEGPSP CSFRWPHAIA GNGTTLYVAD AGNHRVLGWT PIPARDTPAC LALGQRDFQS AWEMPHTPPG PSALRFPYAV ACASGRLIVA DTANNRVLMW HTLPRAGVFL PADMVIGQPD FAGNGENRWQ AVERDTLCWP YGISCHNHRL AIADSGNNRV IIWDISV
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