Gene Rcas_3737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3737 
Symbol 
ID5541239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4904936 
End bp4905250 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content56% 
IMG OID640895848 
Productiojap-like protein 
Protein accessionYP_001433795 
Protein GI156743666 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000069668 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000198678 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCGCTCG CCGAAGACAA ACAGGCCAGC AATATCGTGC TGCTGGACTT GCGCCGGCTG 
AACACAGTCG CAGATTATTT CGTCATCTGC ACCGGCGGCA GTGAACGCCA ACTCAAAGCG
ATCACCGAGT CGATTGACGA AGGTCTTGCC CGTGAATACG ACCTTCAGCC GCGCATCGAA
GGGACAGCCG ACACAGGTTG GGTGCTCCTC GACTATGGTG ACGTTGTCGT CCACATTTTT
TCTGTCGAAC TGCGCGACCG TTATCGGCTT GAACGGCTGT GGAGCAAAGC GACCCCGGTT
GTTGTCTTAC AATAG
 
Protein sequence
MALAEDKQAS NIVLLDLRRL NTVADYFVIC TGGSERQLKA ITESIDEGLA REYDLQPRIE 
GTADTGWVLL DYGDVVVHIF SVELRDRYRL ERLWSKATPV VVLQ