| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3716 |
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| Symbol | |
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| ID | 5541218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4875108 |
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| End bp | 4876097 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895827 |
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| Product | peptidase S58 DmpA |
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| Protein accession | YP_001433774 |
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| Protein GI | 156743645 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00511947 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCCTT CGATAACCGA TGTTTCGGGT GTTCTGGTGG GGCACGCACA GGACGGTGCA
GCGTTGACCG GGTGTACAGT TGTGCTCGCG CCCGAAGGGG CGGTCGGTGC AGTGGATGTT
CGTGGCGGCG CTCCAGGGAC GCGCGAGACC GATCTGCTCG CGCCGGTTGC AACCGTCGAT
ATGGTGCATG CCGTGGCACT GTGTGGCGGG AGCGCCTTCG GTCTGGCGGC AGCCACCGGT
GTGGTGCAGT GGCTCTCTGA ACAGGGAATT GGTTTCCCGA CCGGGGTTCG TCCGGTGCCA
ATCGTGCCGG CTGCCGTGAT CTTCGATCTT GCGATTGGCG ACGCAGATCG TTTCCCCGAT
GCTGCGATGG GGTATGCGGC GTGTAGCGCT GCCGGCGCGT CGGTGAGCGA GGGATGTGTC
GGCGCAGGCA TTGGCGCGAC GGTAGGGAAA ATTCGTGGCA TGCAGTACGC GATGAAATCC
GGCGTCGGTA CGTGGAGCGA ACGCCTGGTG GATGGCGTGG TCGTGGGTGC GCTGGCGGTT
TGCAATGCGT TTGGCGATGT GTACGATGAG CGGAGTGGTC GTCTGCTGGC GGGGGCGCGC
GCTGACGATG GTTCGTTCGT CGATGCAATG GCGCTGCTAC GTGGCGCAGG TCCGGCGTTG
CTGTGGTCGG CGGCATCGGA AGGGCAGAAT ACCACCCTGG CGGTGATTGC GACCGATGCG
CGTCTGACGA AAGCGGAAGC GACGAAGGTG GCGCAGATGG CGCAGGATGC GCTGGCGCGA
ACAATTCGCC CGGTGCATAC GCCGTTCGAT GGCGATACCG TCTTTGTGCT CGCTACCGGG
AGGCGCGCGT CACCGGGGGT GTTGCCGCTT GGCGCCATCG CTGCCGAGGT TCTGGCGCGC
GCCATTGAAC GCAGTGTGAC GCAGGCGTGG TCGCTCGGCG GTGTGCCTGG GATGAGGCGA
GACGCGGGAG GCGAGAGGCG AGAGGGGTGA
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| Protein sequence | MSPSITDVSG VLVGHAQDGA ALTGCTVVLA PEGAVGAVDV RGGAPGTRET DLLAPVATVD
MVHAVALCGG SAFGLAAATG VVQWLSEQGI GFPTGVRPVP IVPAAVIFDL AIGDADRFPD
AAMGYAACSA AGASVSEGCV GAGIGATVGK IRGMQYAMKS GVGTWSERLV DGVVVGALAV
CNAFGDVYDE RSGRLLAGAR ADDGSFVDAM ALLRGAGPAL LWSAASEGQN TTLAVIATDA
RLTKAEATKV AQMAQDALAR TIRPVHTPFD GDTVFVLATG RRASPGVLPL GAIAAEVLAR
AIERSVTQAW SLGGVPGMRR DAGGERREG
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