Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3662 |
Symbol | |
ID | 5541164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4790428 |
End bp | 4791219 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895782 |
Product | hypothetical protein |
Protein accession | YP_001433729 |
Protein GI | 156743600 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0914373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.810533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGATG CAACCAGAGG GCGAATGCGG CGCAACCGAC GCCCAACCGA GGACGAGCGT TTGCTGGCGC GCCCCCGCGC CACTACCGAA TTTCTCAGCA CCGATACCTG GCGCGTGCTG CGTATTATGG GGGAGTTTGT CGATGGCTTC GAGACACTGG CGGATGTCGG TCCGGCAGTG ACGATTTTCG GCTCGGCGCG AGTGAGCGCC GATAACCCGC TGTACCAGAC CGCAGTCGAT GTGGCGCGAA CGCTCGGTGA AGCAGGTTTT ACCATCATCA CCGGCGGCGG ACCGGGCATC ATGGAGGCGG GGAATCGCGG CGCGCGCGAA GCCGGAGCGC GTTCGGTCGG TCTCAATATT GAACTTCCCT TTGAGCAGCA CCTCAATCCG TATGTTGACA CCTCGGTGAC GTTTCGCTAC TTCTTTGTGC GAAAGATGAT GCTGGTCAAG TATGCGCAGG CGTTCGTCAT CTTTCCCGGC GGCTTTGGGA CGCTCGATGA ACTCTTCGAG GCGCTGACCC TGGTGCAAAC CGGAAAGGTG CGCAACTTTC CGATCATTCT GTTTGGCAGC GCCTACTGGA GCGGCTTGCT GACCTGGCTG CGCGAAACGG TATTGCCTGC GCGCAACATT GCTGCCGCCG ACGTCGATCT CCTGATCGTC AGCGACTCGG TCGAAGAAGT GCGCGACTTG ATCGTGCGAT CAACATATGA TGCGCAATGG CGCGCCGGAA CTGAAGCGGC GGCGCAGGAG GTCACCCGCC GCGTCCTGGA GAGACGATCC GATAACCCCT AA
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Protein sequence | MDDATRGRMR RNRRPTEDER LLARPRATTE FLSTDTWRVL RIMGEFVDGF ETLADVGPAV TIFGSARVSA DNPLYQTAVD VARTLGEAGF TIITGGGPGI MEAGNRGARE AGARSVGLNI ELPFEQHLNP YVDTSVTFRY FFVRKMMLVK YAQAFVIFPG GFGTLDELFE ALTLVQTGKV RNFPIILFGS AYWSGLLTWL RETVLPARNI AAADVDLLIV SDSVEEVRDL IVRSTYDAQW RAGTEAAAQE VTRRVLERRS DNP
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