Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3651 |
Symbol | |
ID | 5541153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4780587 |
End bp | 4781729 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895771 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001433718 |
Protein GI | 156743589 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.166379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.432603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGG CGTTCGTCTA CCGTCTCTAC CCATCGAAGC CCCAGGAACG GCGGCTGGAA TTCACCCGCG AGACCTGCCG GCGCTTCTAT AACGACTGCC TTGCAGAGCG CAAGACCGCT TACGAGGAAC GCGGTGAGAC GATTCGCAAA TCTGCGCAAC TGCGGCGCGT GAAAGAGCGC AAAGCGACCA ATCCCGACGC TAAAGACGTG CATAGCCACA TCCTGCAGAT CGTGGTAGAC GACCTGGATA AGGCATTTCA AGCCTTCTTC CGTCGTGTGA AAACGGGCGA GAAACCAGGA TACCCCAGGT TCAAGGGACG CAATCGCTGG AAGGGGTTTG GTCTGAAAGA GTACGGCAAC GGCTTTAAGA TCGATGGGCG GCGGCTCCGT ATCACCGGCA TTGGTCGGAT CGCGGTTCGC TGGCATCGTC CCCTTGAAGG GCGGATCAAG ACCCTCCGGA TTGTGAAACG GGCTGGCAAG TGGTACGCCG CCTTTTCGTG CATCACGAAC GAAGTGCCGG CTCCGCCCGC TCAGCGCGAT GTGGGGATTG ATGTCGGCGT CGCCTGCCTG CTCACGACAA GCGATGGGGA GAAGGTGGAC AACCCGCGCT GGCATCGCGT CGAGCAGCGG AAATTGCGCG TGTTGCAGCG ACGGGTTGCC CGTCGCAAGA AAGGCGGCGG CAACCGCAAA AAGGCCGTGC TTGCGCTGCA ACGCCAACAC GAACGGATCG CCAATCGGCG GAAGGACTTC TTGAATAAGC TGGTACACAA CCTGATCACA CGCTACGACC GGATTGCGCT GGAAGACCTG CGCATCACGA ACATGGTGCG CAACCCGCGC CTGGCGAAGA GCATTTTGGA CGCTTCGTGG GGCTGCCTCA TACGACGCCT GATGAGCAAG GCTGCAAGCG CTGGCCGTCT GGTGCTGCTG GTAGACCCAC GGAACACGTC GCAGGACTGC TCTCAGTGTG GGCGGCTCGT TGCGAAGGAT TTGAGCGTGC GCGTGCATCA GTGTCCACAT TGCGGCGTTG TGCTCGATAG AGATCACAAC GCGGCGATCA ATATCCTGAA AAGGGCTGGA CAAGTCCTTT GGGGCATAAG CTCGTCACCA GGCGGGTTGC CCCAAGAAGC TGCCGGGTTT TAA
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Protein sequence | MRKAFVYRLY PSKPQERRLE FTRETCRRFY NDCLAERKTA YEERGETIRK SAQLRRVKER KATNPDAKDV HSHILQIVVD DLDKAFQAFF RRVKTGEKPG YPRFKGRNRW KGFGLKEYGN GFKIDGRRLR ITGIGRIAVR WHRPLEGRIK TLRIVKRAGK WYAAFSCITN EVPAPPAQRD VGIDVGVACL LTTSDGEKVD NPRWHRVEQR KLRVLQRRVA RRKKGGGNRK KAVLALQRQH ERIANRRKDF LNKLVHNLIT RYDRIALEDL RITNMVRNPR LAKSILDASW GCLIRRLMSK AASAGRLVLL VDPRNTSQDC SQCGRLVAKD LSVRVHQCPH CGVVLDRDHN AAINILKRAG QVLWGISSSP GGLPQEAAGF
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