| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3650 |
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| Symbol | |
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| ID | 5541152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4779329 |
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| End bp | 4780180 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895770 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001433717 |
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| Protein GI | 156743588 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.537314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.17374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCC TGGTTTCCGC GCGCGCGGAA AGCGTCGTGA CCTATCTGAA CCCGATGATC
CTGGCGCGCA AACTGTGGCG CCACCGCGAC CTGATCGTGC AGTTGACGCG GCGCGAGATC
GAAGGACGGT ATCGCGGCGC CTATCTGGGC ATTCTCTGGT CGCTGGCGCA TCCGCTGCTC
ATGCTGACAG TCTACACGCT GGTATTCGGC GTCATTTTTC AGAGTCGCTG GCCCCAGGCG
CGCACCGATA GTCTGGCGGA TTTTGCCCTG ATCCTGTTCG CCGGGTTGTC GGCGTACTCC
TGTTTCAGCG AAACGGTGGG TCGCGCCGCC GGATCAATCG TCAGCGTGCC GAACTACGTC
AAGAAGGTCA TCTTTCCGCT CGAAGTGCTG CCGATCAGCA TTCTCGGCGC AGCGCTGTTT
CATATGCTGA TCAGCATCGG CGTCTTACTC GTCGTCCATC TGGCGATTGG CGGCGGCATG
CCATGGACGG TCATCCTGCT GCCGCTGGTC AGTCTGCCGC TGATCTTCCT CAGCCTGGGG
CTGGCATGGT TCGTCGCCAG CCTTGGCGTC TACATCCGCG ATGTGGGTCA GGCGGTTGGA
ATCGTGCTCC AGGTGATGTT TTTTCTGACG CCGATCTTCT ACTCGATTCA GATCATTCCG
GAACCGTTTC GCACGCTGGT GCTGTTCAAC CCGATGGCGC CGGTGACCGA GAACTTTCGC
CGGGTGCTGT TGTGGGGGCA GTTGCCCAGT TTTCCCGGCA CTCTCTGGTG GATTCTGGGA
ACCGGCGTCG TGATGATGCT GGGACACGCC TGGTTTATGA AGACGCGCAA AGGGTTTGCC
GATGTGTTGT GA
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| Protein sequence | MAVLVSARAE SVVTYLNPMI LARKLWRHRD LIVQLTRREI EGRYRGAYLG ILWSLAHPLL
MLTVYTLVFG VIFQSRWPQA RTDSLADFAL ILFAGLSAYS CFSETVGRAA GSIVSVPNYV
KKVIFPLEVL PISILGAALF HMLISIGVLL VVHLAIGGGM PWTVILLPLV SLPLIFLSLG
LAWFVASLGV YIRDVGQAVG IVLQVMFFLT PIFYSIQIIP EPFRTLVLFN PMAPVTENFR
RVLLWGQLPS FPGTLWWILG TGVVMMLGHA WFMKTRKGFA DVL
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