| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3648 |
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| Symbol | |
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| ID | 5541150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4774557 |
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| End bp | 4776773 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895768 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001433715 |
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| Protein GI | 156743586 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase
[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0250737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0159543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCT GGCTGCTCAC ATCACAATTT CCTCCGGCAG TGATCGGCGG CATTGCGCGC
TATGTTGCCA ATGCCGCCGA TATGTTTGCC CGCGCCGGTC ATCGGGTGAC GGTGGTGACG
GTCGATCAGA CTGAAGGCGA GGAGGTTCTG CCATCGGGGG TGCGGGTCCT TCGCTTCGTG
CCGCGAGGTC GGGCGTTCGC CCCATATGTT GCCAAGGACG CGACCGATCA CAATCCGGCG
TTCCCGTACA ATATCATGGC GTATCCGATT GCACTGAGTT ATGAACTGGC GGAACGGGTT
TCGTCGTATG TGCAGCGCGA TGGCGTGCTT CCCGATATGA TCGAATGCCA GGAATATCTG
GCGCTGCCGT ATTACCTGAT CCAGCGCCGC CTGGTCGAGC GCCATCCGCT CGGTGACGTT
CCGCTGCTGT TGCACCTTCA CAGTCCCGAC TTTTGCATTA CGCGCGCCAA CCGCCAACCG
CGCTATCGTT TGCCGGGGTA CTGGATCGGG CGGATGGAAC GGTTCTGTAT GCATGCGGCG
GATGCCATGC TGTCACCGAG TTTCTTTCTT GCGAACCAGA TCGCCGGAGA GATGATGCAG
CTCTCGCACG CAATTGAGGT CGTTCCGTAC CCGTACCTAC CCTTGCCGGC GCTTGAAACT
ATGCCGGAGC GCGGCGATCT TGTGTTCTTT GGGCGGCTGG AGCCGCGGAA GGGGGTCATG
GAGTTTGTTG GAGTGTGCGA TCACCTCTGG TCACGTGGCT ACGATTTTCG GCTGACGCTC
ATAGGTGACG ACACGCCCTT CGGTCCGCGT GGAATGTCGG TTGGTGCGTG GCTACGCTGG
CGGTATGGTC GCCGGATTGA TGAAGGGCGC CTGATCATGA CCGGCGCATC GCTTCCGCCA
GAAGACCTCT GGCGGCGACT GGAAAAGGCA TGGGCGGTGG TTGTGCCTTC GACATGGGAG
AATTATCCGA ATGTCTGCAT CGAAGCGATG GCGTTGGGGA AGCTGGTGAT TGCCTCGACT
TCCGGCGGTC AGGCGGAAAT GATCGGCGCC GACGGGGATT GCGGGATACT GTTCCGTTGG
GATCAGCCGG GCGATTGCGT TGCTGCCGTG GAACGGGCGT TGGCGCTGTC GGTCGATGAG
GTGCGGGCAA TCGGTGCGCG CGCGCGGGAT CGCATCACGG CGCTGACATC GTTTGAGGCG
GTGCTGCCGC GACGGATGGC GCATTTCGAG CAGATCACGA CGTGTATGCG ACCTCGCCGA
TCTTTTCCGG GTCTGATGCC GGATGTTCCT GCACCAATGC GCACGGTGAC GCCCGACACA
GTTCCGGGGC TGCTTTCGGT GGTTGTGCCC TATCACAACC TTGGAGCATA CCTTGCCGAA
ACGATTGCCA GCATCGTCGC TTCTTCCTAT CGTCCGCTGG ACATCGTGAT CGTCGATGAC
GGAAGCGACG ATCCTGCAAG TGTGGCGGCG CTCGAACAGG TCGGTCAGAT GCATCCCGAT
CTGGTGCGGA TTGTCCGGTG TGAGCGCGGC GGGTTGGCGC GCGCGCGCAA TCGCGGCGCT
CAGGCGGCGC GTGGTGAGTT CCTGGCGTTT GTCGATGCGG ATGATCTGGT CGAGCCTTCC
TTTTTTGAGC GCGCCATCGA TGTGCTGCAA CGGTACGATA ACGTCAGTTT CGTCTATTCC
TGGGTGCGCT TCTTCGGCGA GTCCGATGCG TGCTGGCCCA CCTGGAATGT TGAGTTCCCC
TATCTTCTGG CGCACAATAT GTTGACGGCG TTTGTCGTCG TGCGGCGGAG CGATTTTCTT
GCCTGGGGTC AGAACGATCC ATCGCTCAGC GATGCGCTCG AAGATTATGA TGCCTGGATC
TCGATGGTTG AGCAGGGGTG CATTGGGGTC AGTCTCCCCG ACCCTCTGGT GCGCTACCGG
ATGCGCAGCG ACTCGATGTA TCACTCGTTG AGCGACGCGC AGATTCTGGA GATGTACGAC
CGGATCGTGG CTCGCCATCG TTCTGTGTAC GAACGCTATG GCGCGGAACT CTTTGCGTTG
CAGAACGAAA ACGGACCAGG ATGGCGCTGG AACCATCCGG CGACCGATCC GCCCGATGTT
GTGCAGCATC AGCAGATTGC CGCACTGCAA CATCGAGTCG CTCGACTCGA ACGCTTGCTG
GCGATACCAC TCAGAGTGCG CCGAACGTTG CGTGACCTGT GGAGACGTCA GAGGTGA
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| Protein sequence | MNLWLLTSQF PPAVIGGIAR YVANAADMFA RAGHRVTVVT VDQTEGEEVL PSGVRVLRFV
PRGRAFAPYV AKDATDHNPA FPYNIMAYPI ALSYELAERV SSYVQRDGVL PDMIECQEYL
ALPYYLIQRR LVERHPLGDV PLLLHLHSPD FCITRANRQP RYRLPGYWIG RMERFCMHAA
DAMLSPSFFL ANQIAGEMMQ LSHAIEVVPY PYLPLPALET MPERGDLVFF GRLEPRKGVM
EFVGVCDHLW SRGYDFRLTL IGDDTPFGPR GMSVGAWLRW RYGRRIDEGR LIMTGASLPP
EDLWRRLEKA WAVVVPSTWE NYPNVCIEAM ALGKLVIAST SGGQAEMIGA DGDCGILFRW
DQPGDCVAAV ERALALSVDE VRAIGARARD RITALTSFEA VLPRRMAHFE QITTCMRPRR
SFPGLMPDVP APMRTVTPDT VPGLLSVVVP YHNLGAYLAE TIASIVASSY RPLDIVIVDD
GSDDPASVAA LEQVGQMHPD LVRIVRCERG GLARARNRGA QAARGEFLAF VDADDLVEPS
FFERAIDVLQ RYDNVSFVYS WVRFFGESDA CWPTWNVEFP YLLAHNMLTA FVVVRRSDFL
AWGQNDPSLS DALEDYDAWI SMVEQGCIGV SLPDPLVRYR MRSDSMYHSL SDAQILEMYD
RIVARHRSVY ERYGAELFAL QNENGPGWRW NHPATDPPDV VQHQQIAALQ HRVARLERLL
AIPLRVRRTL RDLWRRQR
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