| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3616 |
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| Symbol | |
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| ID | 5541118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4726807 |
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| End bp | 4727763 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895736 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001433683 |
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| Protein GI | 156743554 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC TCATTCCGCA GGCGCTCGCA CCCCTGATTG AACCACGCCT GGCGGAGATG
GCGCCGGACC TGGAGGTGGT GCGTTTCGAC GATGCCGGAG AACCGGAGGG GGATGTCTGC
GACGTAACTA TGCTGCTCCG CTGGTGGACG CCGGTCAGTG CGCTGCGCCG CGTTCTGGCG
GCAGCGCCGA ACCTGCGCTG GATCCACACG CCGAGCGCAG GCGTTGAGCA TCTCCTGATT
CCCGAAATTC TCGAACGCGA CATTGTGCTG ACGAATTCGG CAGGCGCACA GGCTATTCCT
ATCGCCGAGT TCGTTTTGAT GTACATGCTG AACCATGTCA AACGCGCCTT CGACCTCAAG
GCGCTGGCGC CCGACGAGTG GGATCGCGGC GACGATATTC CCTGCGATGA ACTGTTCGAG
CGCACGCTCC TGATCATTGG CTATGGTCAC ATCGGCGCAG AGATCGCCAA ACGGGCGCGC
GCCTTCGGTA TGCGGATCCT TGCCAGCCGC CGCCATCCCC AACCAACCGA CGGGGTGGAT
GTGATGGTCG GGGAGCATGG CTGGCGCGAC CTTCTCCCAC AGTCTGATTA TATCGTTCTT
GCCGTACCGC TGACCGCTGC AACCCGTGGG ATGTTCGACG CGGACGCTTT CCGGCGTATG
AAGTCGAGCG CCTACCTGAT CAATATCGCG CGCGGGCAGA TCGTTGACAC CGATGCGCTC
CTGGAGGCGC TGCACAGCGG GCGAATCGCC GGCGCGGCGC TCGATGCGCT GCCCATCGAG
CCACTGCCTC CCGACCATCC GCTCTGGAAA GCGCCCAATG TCTGGATTAC GCCGCATATT
TCGTATTCGT CACCACGCAC GCGCGAACGT ATTATCGATA TCTTCTGCGA GAATCTCCGC
CGCTATCGAA CGGGTGAACC GCTGCTCAAC GTTGTGGATA AGGCAGCTGG CTATTGA
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| Protein sequence | MKLLIPQALA PLIEPRLAEM APDLEVVRFD DAGEPEGDVC DVTMLLRWWT PVSALRRVLA
AAPNLRWIHT PSAGVEHLLI PEILERDIVL TNSAGAQAIP IAEFVLMYML NHVKRAFDLK
ALAPDEWDRG DDIPCDELFE RTLLIIGYGH IGAEIAKRAR AFGMRILASR RHPQPTDGVD
VMVGEHGWRD LLPQSDYIVL AVPLTAATRG MFDADAFRRM KSSAYLINIA RGQIVDTDAL
LEALHSGRIA GAALDALPIE PLPPDHPLWK APNVWITPHI SYSSPRTRER IIDIFCENLR
RYRTGEPLLN VVDKAAGY
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