| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3611 |
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| Symbol | |
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| ID | 5541113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4718997 |
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| End bp | 4721168 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895731 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_001433678 |
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| Protein GI | 156743549 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTACC TGGTTGTTTC CAATCATCAC ACGTTTATGA TCAGCGACCA TAACGGCGAT
ATTCCCGTCG AGGACTCGCC ATTCGGTCTG TATTTCTACG ATATGCGCCA CCTCAGCGGC
TTCCAGGTGC GCCTGAACAG TCAACCGCTC GAACTGCTCG CTTCGAGTGA TGAACATGTG
TATCGTGCCG TGTTCCTCCT GACGAACGGC GCATCCGGTA ACGAACAGGG ACTCGACCGC
CAGACAATCG CGGTGCGGCG CGAGCGGGTC GCACACGAGG CGGTCTATGA GCGGATTGGG
GTCACCAACT ACAATCGCAC TCCAATCGAG TGTGATCTGA CGGTCGAACT GGCCGTCGAT
TTTGCCGATA TGTTCGTTGT GCGCGGCTTC GCCGGCGGTC CACGCGGTTC AATAGCGCCG
GTCGAATATC ACGGCGATCG GCTCCGATTC ATCTATCGCG GCGCCGATGA TGTGGTGCGC
ACCACCGACA TTCATCTGAG TGTCATCCCG GATACGGTTG ATATACTCGG CGCTGAAGCG
CCGCCGCCCT CTCCCGGTCC GCAAGGCGAA GGGGCGCGCC GTCTGCGGCA ACTGCCAACC
CCCGCGCGCG CGCAGGTACA CTGGCGTCTG ACGCTGGAAC CGCATGCCAC CTGGAGCGTT
GATCTGACCA TCACACCTGC GACCGATCCA TTGGACCAAC AGAACAGTCG TGCAGGCGAA
TCGTTTGAGA CGGCGCTGGA AGCGGTACGC GCATCATACC AGGCATGGGA CGAAGCGGCA
GCCATCGTGA CAACCGATAA CCCGGCGTTC AACGAGATAC TACGGCGCAG CAGCCACGAT
CTCCGTGCAT TGACAGTGCC GTTTGGCGAT CTCTTCCTGC CGGTGGCGGG AATTCCCTGG
TTTGCGGTTC CCTTCGGGCG CGATTCGTTG ATTACCAGTT TTCAGGCGCT CTGGTTTCAG
CCGGACCTGG CGCGTAGCAC GTTGCGCTAT CTGGCGGCGC ATCAGGGAAC ACAGGATAAT
CCCTGGCGCG ATGAGCAGCC GGGCAAGACT CTGCACGAAA TGCGCTTTGG GGAACTCGCC
AACACCAACA GCGTTCCGTT CAATCCCTAT TACGGCAGCA TTGATGCCAC GCTCCTGTTC
TTAATGCTGT TCGCTGCCAC CGTGCGCTGG ACCGGCGACA GGACGCTGTA CCACGATCTG
CTGCCGGCGG CGTTGCGCGC GATCGACTGG ATCGACCTTT ATGCCGATGC CGATGGTGAT
GGTTATATCG CGTTCGAGCC GCGCTCGACA GCAGGGTTGC GCATTCAGGG GTGGAAGGAC
TCGCGCGATT CGGTGATGCA TCCCGACGGA ACCCTTGCCG AACCGCCGCT GGCGCTGGTG
GAGGTGCAGG CATACGCTTA TGCCGCCAAA ACCTGGATGG CGGATCTGTT CGAGCGCATG
GGAGAACCTG ACCGGGCGGC AGAGTTGCGT CTTGGCGCTG CGGCGCTGAA AGAGCGGTTC
AATGCCGATT TCTGGCTGGA GGACGAGAAG TTCTACGCGC AGGCGATTGA GGTTGGCAAA
GGACCCATTC GTGAAGTCAC CAGCAATCCG GGACACGCAC TTCTGTGCGA TCTTTTGCTG
CCGGAATACG CTGCGCAGGT AGCAGATCGA CTAACAGCGC CCGATATGTT GTCGAGCTGG
GGGGTGCGCA CCCGCAGCGC CGCCGACCCG AATTACAATC CGATAAGTTA TCACAATGGC
AGCGTCTGGC CCCACGATAA CTCGCTGATC CTCTGGGGAT TGACTCGGAG TGGGTTCCGT
GACAAAGCCA ATGAAATCGC CGGTCGCCTG GTTGCAGCGG CGGCGCATTT CCGCTTGCGT
CGCCTGCCCG AGTTGATGTG CGGGTATGAC CGCGATCCTG AAACGTTCGA TGGTCCTGTG
CCATACCCGG TGAGTTGCCG TCCACAGGCG TGGGCTGCCG GTACAGGGCT GCTGATCGTG
CGCAGCATTC TGGGGCTTGA GGTCGATGCG CTCGACAACA CACTGCACCT TGCGCCGCAT
CTTCCGCCTT GGCTCTCGTG GGTCGAGGTG CAGAATCTGC GTGTCGGCGA ACGACGGGTC
CATTTTCGGG CAACGCACGC CGGGGTGGAA ATCATTGCGG ATGGCGGGGT CGAGGTGCGC
ATCAAGGGTT GA
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| Protein sequence | MDYLVVSNHH TFMISDHNGD IPVEDSPFGL YFYDMRHLSG FQVRLNSQPL ELLASSDEHV
YRAVFLLTNG ASGNEQGLDR QTIAVRRERV AHEAVYERIG VTNYNRTPIE CDLTVELAVD
FADMFVVRGF AGGPRGSIAP VEYHGDRLRF IYRGADDVVR TTDIHLSVIP DTVDILGAEA
PPPSPGPQGE GARRLRQLPT PARAQVHWRL TLEPHATWSV DLTITPATDP LDQQNSRAGE
SFETALEAVR ASYQAWDEAA AIVTTDNPAF NEILRRSSHD LRALTVPFGD LFLPVAGIPW
FAVPFGRDSL ITSFQALWFQ PDLARSTLRY LAAHQGTQDN PWRDEQPGKT LHEMRFGELA
NTNSVPFNPY YGSIDATLLF LMLFAATVRW TGDRTLYHDL LPAALRAIDW IDLYADADGD
GYIAFEPRST AGLRIQGWKD SRDSVMHPDG TLAEPPLALV EVQAYAYAAK TWMADLFERM
GEPDRAAELR LGAAALKERF NADFWLEDEK FYAQAIEVGK GPIREVTSNP GHALLCDLLL
PEYAAQVADR LTAPDMLSSW GVRTRSAADP NYNPISYHNG SVWPHDNSLI LWGLTRSGFR
DKANEIAGRL VAAAAHFRLR RLPELMCGYD RDPETFDGPV PYPVSCRPQA WAAGTGLLIV
RSILGLEVDA LDNTLHLAPH LPPWLSWVEV QNLRVGERRV HFRATHAGVE IIADGGVEVR
IKG
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