Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3585 |
Symbol | |
ID | 5541086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4678816 |
End bp | 4680633 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895704 |
Product | oligoendopeptidase F |
Protein accession | YP_001433652 |
Protein GI | 156743523 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAAA TGCAGAAGAT TCCGCGCCGT GACGAGATTC CTGAACAGTA CCGCTGGGAT CTCACAACCA TATACCCGGA CGATGCCGCC TGGGAGCAGG ACATCGCCGC TATTGAGAGC ATGCTCGGCG ATGTCGCTGC TCTCCAGGGG CGCGTCGCGC GCAGCGCCGA CGATCTGCTG GCGGCGCTGC GCATGCGCGA TCAGGTGTCG ATGCGTCTCT GGCAGGTCTA CGTCTATGCC AATCGGCGTT TCGATAGCGA CACGACCGAT CCAGTCGGGC AGGCGCTCGC CGAGCGCGCC GGGACGCTGG CGGCAAAGGT AAGCGCCGCT CTTGCGTTTA TCGATCCGGA AATCCTCGTG GCGCCGGAGG AGCAGATTCG CGCCTGGCTG CGGGACCATC CAGACCTGGC GGTGTATGAG TATGCGCTGG ATCAACTGCT GCGCCAGCGT GATCATGTGC GCTCTGCGGA GGTTGAAGCC ATCCTGGCGC AATTCAGCGA TATTACGCGT GCGCCGGGCG AAATCTTCGA GGTGTTGACG AATGCCGACC TGAGTTTCCC GACGATTGAG GATGAACACG GGCAGACGGT GCAACTGTCG CATGGGCGCT ACATGCGCTT GTTGCGCAGC CCTGACCGGC GGGTGCGTCG CGATGCCTTC ATCGGGTACT ACAGCGCCTT CCAGGGAATT CGCAATACGC TTGGTGCGTC GCTTGCGGCT CAGGTGCGCA CCCACGTGCT CAATGCGCGT GTGCGCAATT ATACGTCGTC ACTGGAAGCC GCCCTGACGC CGAATGATAT TCCGGTCGAG GTCTACCACA ACCTGATTGC GACGGTCAAC GCCAATCTGT CGCGTCTCCA CCGCTATCTC CGGTTGCGCC GGCGGATCAT GGGGTTGGAC GAGTTGCACT TCTACGACCT CTACGCGCCG CTGGTTCCCG AAGCCGATGT TGCGGTTCCG TATGCCGAAG GGGAGCGTCT GGTGCGCGCG GCGTTCGAGC CGCTCGGTGA GGAGTATGGC GCTGCCATCG CGGAAGCGTT CGGCAACCGC TGGATCGATG TGTACGAGAA TGTCGGCAAG CGCAGCGGAG CGTACAGCGA TGGCGCCTAT ACAACGGCGC CGTTCATGCT GCTCAATTAT CAGGATCGCC TGAACGATGT GTTTACGCTG GCGCACGAAC TCGGTCATGC GATGCACTCG TACTTCACGC GCAAGACGCA GCCGTATGTC TACGGCGATT ACACGATCTT TGTCGCTGAA GTCGCTTCGA CGCTCAACGA GGCGTTATTG ACCGATTATC TGTTGCAGAC GCGCGATGAC CCGACTCTGC GGCGTTATCT GATCGTCGAG CAGTTGGAGG ACATCCGCAC GACTCTCTTC CGTCAGACGA TGTTCGCTGA GTTTGAACTC GAGATTCATC GCCGTGCAGA GGCGGGTGAG CCGTTGACGA CCGAACTGTT CAGCACGATC TATCGCAATC TTGTGGCGCG CTACCACGGC TCGGACGTGA TGCTCGATGA GCAGATTGCA CTGGAGTGGG CGCGGATCCC GCACTTCTAC TACAACTTCT ACGTCTATCA GTATGCCACG GGTCTGTCGG CGGCGCTGGC GTTGCATGCG CGCATCGTTA ACGAAGGGCG TCCGGCAATC GAGCGGTATC TGCGCTTCCT CCGCAGCGGG TCGTCACGTC CCTCCATCGA ATTGCTGCGC GATGCCGGTG TTGATATGCT CTCACCTGCC CCCATTCAGG CGGCGATGGA TCATTTCGAT GCATTGCTCG GCGAGTTGGA GCAGATGACG GCAGGCGCGC AGCAGTGA
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Protein sequence | MTEMQKIPRR DEIPEQYRWD LTTIYPDDAA WEQDIAAIES MLGDVAALQG RVARSADDLL AALRMRDQVS MRLWQVYVYA NRRFDSDTTD PVGQALAERA GTLAAKVSAA LAFIDPEILV APEEQIRAWL RDHPDLAVYE YALDQLLRQR DHVRSAEVEA ILAQFSDITR APGEIFEVLT NADLSFPTIE DEHGQTVQLS HGRYMRLLRS PDRRVRRDAF IGYYSAFQGI RNTLGASLAA QVRTHVLNAR VRNYTSSLEA ALTPNDIPVE VYHNLIATVN ANLSRLHRYL RLRRRIMGLD ELHFYDLYAP LVPEADVAVP YAEGERLVRA AFEPLGEEYG AAIAEAFGNR WIDVYENVGK RSGAYSDGAY TTAPFMLLNY QDRLNDVFTL AHELGHAMHS YFTRKTQPYV YGDYTIFVAE VASTLNEALL TDYLLQTRDD PTLRRYLIVE QLEDIRTTLF RQTMFAEFEL EIHRRAEAGE PLTTELFSTI YRNLVARYHG SDVMLDEQIA LEWARIPHFY YNFYVYQYAT GLSAALALHA RIVNEGRPAI ERYLRFLRSG SSRPSIELLR DAGVDMLSPA PIQAAMDHFD ALLGELEQMT AGAQQ
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