Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3532 |
Symbol | |
ID | 5541031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4604784 |
End bp | 4605365 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895650 |
Product | isoprenylcysteine carboxyl methyltransferase |
Protein accession | YP_001433600 |
Protein GI | 156743471 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.684224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCA TGCGGCATCG TCAATCGTCA TTGGTGTTAT GGCGTCGGCA TATGCCTGTG GCCTTATGTG ATGTGATGGT CATGATACAG AAAGCACGGT CGCTGATGCA AACATTCATC GAACGCGGCG GATGGTGGGT GAGCGCGCAG TTCGGGCTGC TCTTTGCGCT TGTGCTGGCG CCATCGGAAT TGCCGTGGTT GCCGGCGTTG TCATTTTTGC GGGAACAGGG TGCGCTGATC GCTGGCTTCA TCCTGGGAGG GTGTGGCGTG GCGCTGGCAG GCGCAGGACT GCTGCACCTC GGGGCAAACC TGACCCCTTT CCCCCGACCG CGTGATAATG GCGCACTCGT TCAGCATGGC GTCTACGCCA TCGTGCGCCA TCCCATTTAC AGCGGCATCA TCCTTGGCGC CTTCGGATGG TCGCTGGTGC GCGGCAGCAG CGTCGCGCTG GCGTTGAGCG CGGCGCTCCT GATCTTCTTC CACTTCAAAT CGCGCCGCGA GGAGCGCTGG CTTGTCGAGC GCTACCCGGA GTACGCCGAC TATCAGCAGC GCGTGAAGAA GATCATCCCG TTCATCTGGT GA
|
Protein sequence | MTSMRHRQSS LVLWRRHMPV ALCDVMVMIQ KARSLMQTFI ERGGWWVSAQ FGLLFALVLA PSELPWLPAL SFLREQGALI AGFILGGCGV ALAGAGLLHL GANLTPFPRP RDNGALVQHG VYAIVRHPIY SGIILGAFGW SLVRGSSVAL ALSAALLIFF HFKSRREERW LVERYPEYAD YQQRVKKIIP FIW
|
| |