Gene Rcas_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3525 
Symbol 
ID5541024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4591595 
End bp4592014 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID640895643 
ProductFHA domain-containing protein 
Protein accessionYP_001433593 
Protein GI156743464 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.995835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA GTTCCGGGCA ACAACCGGAC AGTACGCGAA GCGACTTGCC GGTGCAGGCA 
GGACCTGGAG CGGCGCGTCT GGTTATCCGT CGTGATGGCG TGATCGAACG TCGGATGGTG
CTGGGTGAGG TAGTGATCAC GGTCGGGCGC GCGCTCAGCA ACGATCTGGT GTTAAGCTAC
GAGGGGGTCT CGCGCCGCCA CGCCGAGTTC CATCCCTGCC CGGAAGGGGT GATGGTGGTC
GATGTCGGCA GCGCCAACGG CACATTCGTC GATGGTCGCC GCCTTGCGCC GCATGTGCCG
CACCTCCTGC GCGACAGCAT GTTTTGCTCT ATCGGTCCCT ATACGATCAC CTATCACGCC
CCAGGATCGC TGTCGCGCAT TGGCGCCCTG CCGACAGTTC CGCTGCCTGA GGCATCGTAA
 
Protein sequence
MNNSSGQQPD STRSDLPVQA GPGAARLVIR RDGVIERRMV LGEVVITVGR ALSNDLVLSY 
EGVSRRHAEF HPCPEGVMVV DVGSANGTFV DGRRLAPHVP HLLRDSMFCS IGPYTITYHA
PGSLSRIGAL PTVPLPEAS