| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3517 |
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| Symbol | |
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| ID | 5541016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4582470 |
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| End bp | 4582982 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640895635 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_001433585 |
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| Protein GI | 156743456 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCT TTCGCGGCAT CGCCCACGTC TATGGCGATA ACATCGATAC TGATCGCATT
ATTCCCGGCA AATACACCAA GACGCTCGAT GCGCAGACGC TGGCAGCGCA TGTGCTCGAG
GACCTTGATC CCAACTTCGC CAGCCGAGTG CGTCCGGGTG ATGTGTTCGT CGCCGGCTAT
CATTTTGGCG CCGGCAGTTC CCGAGAACAG GCGGCAATCG CTCTGAAAGT TGCCGGGATC
AGTGTGGTGA TTGCTCGTTC CTTTGCCGGT ATCTTTTATC GCAATGCGAT CAATATCGGG
TTACCTTTGG TCGAAGCGCC TGATCACGCT ATTCTGGACG GCCATTGTGT ATGGGTTGAT
CTTGAGCAAG GTCTGGTGGT TGATGAAACC TCCGGTTGCG TCTATCGTAG CGCCAGAATG
CCGCCGGTGA TGGTGGCGAT TTTGCGCGCA GGCGGGTTGG TCAACTATCT ACGTCAATAT
GGCGATTACG AGATGGAATG CGCAGCGACT TAA
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| Protein sequence | MSVFRGIAHV YGDNIDTDRI IPGKYTKTLD AQTLAAHVLE DLDPNFASRV RPGDVFVAGY
HFGAGSSREQ AAIALKVAGI SVVIARSFAG IFYRNAINIG LPLVEAPDHA ILDGHCVWVD
LEQGLVVDET SGCVYRSARM PPVMVAILRA GGLVNYLRQY GDYEMECAAT
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