| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3516 |
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| Symbol | |
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| ID | 5541015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4581228 |
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| End bp | 4582460 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895634 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | YP_001433584 |
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| Protein GI | 156743455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAAA CGATTGCAGA AAAGGTTGTG TCGCACCATG CAGGGCGTCA GGTCATGGCG
AACGAGATTG CAATTGTTGC GATTGATGGC GCAATGGCAA CCGACGCAAC CGCTCCATTG
GCGATTAAGG CCTTCCGTGA GATGGGTGGG GTTCGTTTGT GGGATCCGTC GCGTGTTGTG
TTGGTGATTG ACCATGCCGC TCCGGCGCCG AATGAGCAGG TGAGCAATCT TCACGCTCTG
ATGCGCGCCT TTGGGCGTGA GATGGGATGT GTCTTATATG ATGTTGGCGA GGGTATCTGC
CATCAGTTGA TGGTTGAATA TGATCACGTG CGTCCTGGCC AGATCATTCT TGGCGCCGAT
TCCCATACTC CAACGTATGG GGCGCTTGGC GCGTTTGCTA TGGGTGTCGG CTCAACCGAT
CTGGCAGCCG CATGGTTGAC CGGAAAGACG TGGCTCAAGA CGCCTGCAAG TATCAAGATT
GTGCTGGACG GCACGTTGCG CACCGGTGTG AGCGCGAAGG ATCTCGTCTT ATTTCTGGTC
AGGCAGATTG GCGCTGATGG CGCACGGTAT CAGGCGGTTG AGTTCACCGG TTCGGCAATT
CGCTCATTGA GCCTCGCTTC GCGAATGACG CTGGCCAATA TGACTGCTGA AATGGGGGCG
CTGACGGCAT TTGTCGACCT GCAAGGATTA GACTTGCCAT ACCGATTCGA TCCAATTCAC
CCCGATCCGG ATGCGGTCTA TAGTGTTGTC TATTCATTCA ACGTGGACCA TCTGCTCCCA
CAAGTGGCTA TTCCGCATGC GCCCAGCAAT GTGGTTCCCA TCGATGAAGT AGCGGGTACG
CCGATCCAGA TGGCATTCAT CGGTTCTTGC ACCAACAGTC GTCTCGAAGA TCTGCGCGCA
GCAGCAGCGG TATTACAAGG GCGCAAACTC GCCCCCGGCG TGCGCCTCAT TATCGCGCCT
GCATCACGGC AAGTCTTCAT GATGGCGCTG CAAGACGGCA CTATTGCCAC TCTCACCGAA
TCGGGCGCAA CCTTCATCAC CGCCGGGTGT GGTCCTTGCG TCGGTACCCA TCAGGGGATT
CCCGGTAATG GCGAGAATGT CATCACCAGC ACGAATCGCA ACTTCCGGGG ACGTATGGGT
AATCCGCACG CCAGCATTTA TCTCGCGTCG CCGGCAGTTG TGGCAGCTTC GGCACTGCGC
GGCGTCATTA CCGATCCTGC TGACGTACTC TGA
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| Protein sequence | MGQTIAEKVV SHHAGRQVMA NEIAIVAIDG AMATDATAPL AIKAFREMGG VRLWDPSRVV
LVIDHAAPAP NEQVSNLHAL MRAFGREMGC VLYDVGEGIC HQLMVEYDHV RPGQIILGAD
SHTPTYGALG AFAMGVGSTD LAAAWLTGKT WLKTPASIKI VLDGTLRTGV SAKDLVLFLV
RQIGADGARY QAVEFTGSAI RSLSLASRMT LANMTAEMGA LTAFVDLQGL DLPYRFDPIH
PDPDAVYSVV YSFNVDHLLP QVAIPHAPSN VVPIDEVAGT PIQMAFIGSC TNSRLEDLRA
AAAVLQGRKL APGVRLIIAP ASRQVFMMAL QDGTIATLTE SGATFITAGC GPCVGTHQGI
PGNGENVITS TNRNFRGRMG NPHASIYLAS PAVVAASALR GVITDPADVL
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