| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3488 |
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| Symbol | |
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| ID | 5540987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4550422 |
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| End bp | 4552080 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895606 |
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| Product | zeta-phytoene desaturase |
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| Protein accession | YP_001433556 |
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| Protein GI | 156743427 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCA AACGCGCAAT TGTTATCGGC GCCGGATTTG GCGGTCTGGC GATGGGCATT
CGTCTGCAAA GCCTGGGGTT CGACACCACC ATTGTCGAAA AACTGGACGG ACCCGGAGGC
CGCGCGTATG TGCGAAAAGT TGACGGATTT ACCTTCGACA TGGGTCCAAC CGTCATTACG
GTGCCGCATT TTATCGAAGA ACTATTCGCG CTAGAACGCG ACGCAGCGAA TCTTGCTGCT
CCTGATTTTC CACCGGAGAC GCTGGTCCCC GAAGCGCGCG TCACCAGCGG CATCAGCAGC
GGTCCCGCCA CCTCAAAGTA TGTGACACTT ACGCCGATCC TTCCCTTCTA TCGCATCTAT
TTCGACGATG GAACTTTCTT CGACTACGAC GGCGATCCAG AGCGCACGCG CGAACAGATT
CGCGCGCTGG CGCCGGAAGA TCTCGAAGGA TACGAGCGGT TCCATGCCGC CGCCGAGGCA
ATCTTCAAGC GCGGATTCCT CGAACTAGGG TACACATACT TCGGCGATAT TGGAACGATG
TTGCGCGTCG TCCCCGATCT GGTGCGTCTC GATGCGGTGC GCCCACTCTT CTCGTTCGTC
AAACGCTACT TCCGCAACCC CAAGATGCAG CAGGTGTTCA GTTTCGAGCC GTTACTGATC
GGCGGCAATC CGTTGCAGGT TCCGGCGATC TATGCCATGA TTCACTTTGT TGAGAAAACC
TGGGGCATTC ATTTCGCTCG CGGCGGCACC GGTGCGCTGG TGCAGGGGTT GGTGCGGAAG
TTTGAGGATT TAGGCGGGGT CATGCGTTAC AACAGCGAGG TGCGCCGGAT TATTGTGACC
GATGAGCACG GGCGAGAGCC GCGCGGTTTG CGCGCGCGGC GCATTGCGCG CGGCGTCGAA
CTGGCTGATG GTACGCGCCT CGAGGCGGAT CTGGTGGTCT CGAACGGCGA TTATGCCACG
ACCTATCTCC GCCTGATTGA CCGGAAGCAC CGTCGGATCA ACAATGATCT GCGGGTGCGC
CTGGCGCGGC AGTCGATGTC GCTGATTGTC ATCTACTTCG GGTTCCGCGC CGATCCGCGC
GATGCGCAGC TGCGCCATCA CAACATTATT CTGGGACCAC GCTACGAGGG GTTGCTGGAA
GATATTTTCA ACCGCAAGAC GCTGGCAGAT GATTTCTCGC AATATCTGCA CATTCCAACG
CTTACCGACC CAAGCCTGGC GCCTCCCGGT CATCACGCGG CCTACACGCT CGTGCCCGTG
CCCCACAACG GTTCCGGGTT GAACTGGTCA CAACTGGCGG AACCTTTCGT CGATAAAGTG
CTCCGGTTTC TCGACGAGCG CGGCTATTTG CCAGGGTTGA TGGATCGTCT GGTGCATAAG
AGTTATATTA CGCCCGATTA CTTCGAGGGA ACGCTCAACA GTTGGCTGGG GAACGGTTTT
GGCGTCGAGC CGCTATTGAT CCAGTCGGCA TACTTTCGCC CGCACAACCG GAGCGAGGAC
ATTGAGCGAC TTTACCTGGT CGGCGCCAGC GTTCAACCGG GTGGAGGCAC GCCGTCGGTC
ATGATGTCGG CAAAAATGAC GGCGCGGGTT ATTGCAAAGG ACTACGGCAT TCCCGACTCA
ATCGTCCGGC GCGTGCCGGA ATCGCTTCAG ATGGTATGA
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| Protein sequence | MERKRAIVIG AGFGGLAMGI RLQSLGFDTT IVEKLDGPGG RAYVRKVDGF TFDMGPTVIT
VPHFIEELFA LERDAANLAA PDFPPETLVP EARVTSGISS GPATSKYVTL TPILPFYRIY
FDDGTFFDYD GDPERTREQI RALAPEDLEG YERFHAAAEA IFKRGFLELG YTYFGDIGTM
LRVVPDLVRL DAVRPLFSFV KRYFRNPKMQ QVFSFEPLLI GGNPLQVPAI YAMIHFVEKT
WGIHFARGGT GALVQGLVRK FEDLGGVMRY NSEVRRIIVT DEHGREPRGL RARRIARGVE
LADGTRLEAD LVVSNGDYAT TYLRLIDRKH RRINNDLRVR LARQSMSLIV IYFGFRADPR
DAQLRHHNII LGPRYEGLLE DIFNRKTLAD DFSQYLHIPT LTDPSLAPPG HHAAYTLVPV
PHNGSGLNWS QLAEPFVDKV LRFLDERGYL PGLMDRLVHK SYITPDYFEG TLNSWLGNGF
GVEPLLIQSA YFRPHNRSED IERLYLVGAS VQPGGGTPSV MMSAKMTARV IAKDYGIPDS
IVRRVPESLQ MV
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