| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3483 |
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| Symbol | |
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| ID | 5540982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4545065 |
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| End bp | 4546726 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895601 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433551 |
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| Protein GI | 156743422 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.201338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTT CACGGCGTCG CTTCCTGGGC GCCGGCGCGA CGCTCGCCGG CGCCAGGATG
TCAGGTGTTC CCACGCAGGT CACTCCCTCG ACACTACCCC CCATTGAACT CATCGCACTC
AATCGCATAG CATATGGACC ACGCCCCGGT GATATTGGGC GAGTGCAGGG AATGGGGTTT
GCAGCCTATG TCGATGAGCA ATTGAATCCG AATGATGCTG ATGATGCGTT GTGTAACCAG
AAGATTGCCG AAGCGCGCCT GCGTATTCAG TACAACGCCG GAATGGGGTA TCCCGCAGTC
GATGAAATGC GTCCCCTGCG CACGATTGTC GAGAACTGGA GTCTCACGCA ACTCTGGTCC
CTCTCAAAGA ATCCAGCGTA TCAGGAGCGG ATCCGTCCTG TTGAAGAAGT CCGCGCAGCG
ACGCTGCTCC GCGCGGTGTA CAGCAAATGG CAATTGCGCG AGGTGCTGGT CGAGTTCTGG
CACAACCATT TCAATGTCGA TGCCTACTCC GACTCGCGCA TCAGCGCAAC CTGGACCCTC
TACGACCGCG ATGTGATCCG ACGGCACTGT CTGGGCAATT TCCGGAGCAT GGTGCGGGAC
GTGGCGAAGA GTATCGCTAT GGGGTTCTAC CTCGACAACG CCTTCAGTCG TGATGGTCCC
GCGAATGAGA ACTATGCCCG CGAATTGTTC GAACTGCACA CGTTGGGACA GGAGAACTAT
CTCAATCATC TGTACAATCG CTGGCGCGAC GTTCCTGGCG CACTGGAAGG CAACCCTGTC
GGGTACATCG ACCAGGACGT GTACGAAGCA GCGCGCGCAT TCACCGGCTG GACGATTGCC
CACGGTCAGA CGGTGAGCGG TAATATCCGC CTGCCGGACA CCGGTGAGTT CGCCTATGTC
GATCTCTGGC ACGACAACGC CCAGAAACGG GTGCTTGCCT TCGAGATCGA TCCGAACCAG
CCTCCATTGT CGGATGGGGA AACGGTCATT CGCCTGGTGA GCGAGCACCC TGGCACAGCA
CGCCACATCT GCCGCAAACT CTGCCGCCGC CTGCTCGCCG ATGACCCGCC CGACTCGCTG
GTAAATGCAC TGGCGAGCGT CTGGCTGACT CACAAGAATG CGCCTGACCA GATTGCCAGA
ACGGTGCGCG CCCTGCTACT GTCGGACGAA TTCGCCAACA CCTTTGGCAG CAAGGTCAAG
CGACCGTTCG AGGTAATCGT TTCATTCTTG CGCGCTACCA ATGCTGATGT CACGCCCAAC
TCCGGTCTGT TCTGGCAGTT GCAGGAAATG GGGTACCGGA TGTTCAACTG GGGACCTCCG
ACGGGCCACC CAGAGGAGAG CGCGGCATGG TTGAGCACGA ATGGCATGCT GCGACGCTGG
AATATCATCA ACCAGTTACA GAGTACCTGG CTCAAGGCGG CTACGTTTGA TCTACCGGGT
CAGACGCCAG CCGGACTGAC CTCACGGCAG ATCGTGGAGT TCTGGATTGC GCGCCTGCTG
GCGATTGCCC CGCCACCGTC CACGATCAAC CGCCTGGTCG ATCTGATGCG CCAGAATGGG
TCGGCGGACG CGCCGCCAAC CGGCAGCGCC GAAGAGATGA CCGACCGCAT CAGGAGTGTG
GTGACGCTGA TTGCGATGAC GCCTGAGTTT CAACTACGAT AG
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| Protein sequence | MTFSRRRFLG AGATLAGARM SGVPTQVTPS TLPPIELIAL NRIAYGPRPG DIGRVQGMGF
AAYVDEQLNP NDADDALCNQ KIAEARLRIQ YNAGMGYPAV DEMRPLRTIV ENWSLTQLWS
LSKNPAYQER IRPVEEVRAA TLLRAVYSKW QLREVLVEFW HNHFNVDAYS DSRISATWTL
YDRDVIRRHC LGNFRSMVRD VAKSIAMGFY LDNAFSRDGP ANENYARELF ELHTLGQENY
LNHLYNRWRD VPGALEGNPV GYIDQDVYEA ARAFTGWTIA HGQTVSGNIR LPDTGEFAYV
DLWHDNAQKR VLAFEIDPNQ PPLSDGETVI RLVSEHPGTA RHICRKLCRR LLADDPPDSL
VNALASVWLT HKNAPDQIAR TVRALLLSDE FANTFGSKVK RPFEVIVSFL RATNADVTPN
SGLFWQLQEM GYRMFNWGPP TGHPEESAAW LSTNGMLRRW NIINQLQSTW LKAATFDLPG
QTPAGLTSRQ IVEFWIARLL AIAPPPSTIN RLVDLMRQNG SADAPPTGSA EEMTDRIRSV
VTLIAMTPEF QLR
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