| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3462 |
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| Symbol | |
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| ID | 5540961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4521823 |
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| End bp | 4523061 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895580 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001433530 |
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| Protein GI | 156743401 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0107746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT GGCAACGTAC CCTCTTCATT CTGGTCGCTG CGCAACTGGT ATCGGCTATC
GGTTTCGGGA TGTTCTTCCC GTTCCTGCCG CTCTACGTCG AGCAACTGGG AACAAACACC
GGCTTGAGTC TTGAGTTCTG GGCCGGTATG GTCTTCTCCG GTCAGGCGCT CACCATGGCG
ATCACGTCGC CGATCTGGGG ATCGCTGGCG GATCGCTATG GTCGCAAGGC GATGATCGAA
CGCGCCATGT ACGGCGGCGC GGCGATCATT CTGTTGATGG GATTCGCTCG CTCGGCGGAA
GAACTGGCGC TGTTGCGCAC GATCCAGGGC GCGATCACCG GCACGATTGC GGCGATCAAC
GCGCTTGCTG CTTCGCTCGT GCCACGTGAG CGCACCGGCT ACGCCATGGG GATGTTGCAG
GTTGGGCTAT GGGCTGGCAT TGCCGCTGGA CCATTGCTCG GCGGGATCGT TGCCGATGCG
TTTGGCTTTC GCGCGGCGTT TCTTGTCACA TCGGTCCTGC TGCTCATCTC CGGCGTCGTC
GTTACGTTTG GCGTCCAGGA GCACTTCACG TCGCCGCCGA AAGGCGTGAA GCGACCCGGC
ATCCTCAACG ATTGGCGGCG CATCCTGGCG CTGCCAGCCG TCCCTGCCGC TTATGCGACG
CGCTTCCTCA ACTGGCTGGG ACCGAACATG CTGTTGCCGA TGCTGCCGCT CTACGTCGCG
TCGCTCATGC GCGGCGGTGC AGGGGTCAGC ACCCTGACCG GTGTGATTGT CGGGCTTTCA
TCGGCTGCTG GCACGGTCAG CGCACTCTAT CTGGGGCGCC TGGGCGACCG TATCGGGCAT
CGGCGGGTAT TGCTCGCGGG CACGCTGGTT GCGGCGCTTT GCTTTGTTCC GCAGGCGTTC
GTCACTGCCG GATGGCAGTT GCTCATCCTT CAAGCGTTGA CCGGAGCGGC GACCGGCGGG
ATGAATCCGG CGCTCAGTGC GTTGCTGGCG CGCTACACCA ACGAAGGAGA CGAAGGAGCA
GTGTTTGGCA TTGACAACTC CGTGAATTCT GCTGCGCGCG CCGCCGCGCC CTTGTGCGGC
GCCATGATCG CCGCATGGTT CGGATTGCCT GCCATCTTCA TCGCAACAGC CCTGGTGCTG
CTGGGCGCGG CGGCGCTGGT CTTCCGCCGC CTGCCGGAGC GAACGGTTGC GTCGTCGGTT
GTGTCGGCAG TTCAGCCATG CGAGCACACG CAGAGGTGA
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| Protein sequence | MTRWQRTLFI LVAAQLVSAI GFGMFFPFLP LYVEQLGTNT GLSLEFWAGM VFSGQALTMA
ITSPIWGSLA DRYGRKAMIE RAMYGGAAII LLMGFARSAE ELALLRTIQG AITGTIAAIN
ALAASLVPRE RTGYAMGMLQ VGLWAGIAAG PLLGGIVADA FGFRAAFLVT SVLLLISGVV
VTFGVQEHFT SPPKGVKRPG ILNDWRRILA LPAVPAAYAT RFLNWLGPNM LLPMLPLYVA
SLMRGGAGVS TLTGVIVGLS SAAGTVSALY LGRLGDRIGH RRVLLAGTLV AALCFVPQAF
VTAGWQLLIL QALTGAATGG MNPALSALLA RYTNEGDEGA VFGIDNSVNS AARAAAPLCG
AMIAAWFGLP AIFIATALVL LGAAALVFRR LPERTVASSV VSAVQPCEHT QR
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