| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3447 |
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| Symbol | |
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| ID | 5540946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4503478 |
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| End bp | 4504242 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895565 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_001433515 |
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| Protein GI | 156743386 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.492648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCCG GCGACTATAT TGTTGAGACT CCAGAGCAGA TCGAACTGGC ATACGATCTT
GCCGGGATCG GTTCGCGGTT TCTGGCAGCA ATTGTTGATA GCGCGCTGAT CGCTCTTGCT
GAATCGGCGC TCTTCTTCGC GCTGGCGCAG ATCGCCGGCG CAATGGAGTT CGCCGAAAGT
GTGCTTATCG CCATTGGCGC GGCGCTCGGG TTTGCCATTC TGTGGGGATA CTACATCGCT
TTTGAGTTGA CATGGAATGG GCAAAGCCCC GGAAAACGCC TGATCGGGCT GCGCGTCGTT
TCGGAAGGCG GACGCCCGAT AACGGTCACC GGTTCGATCA TTCGCAACCT GATCAGGATT
GTGGACTTCC TGCCATTTCT GTATGGCATC GGAGTGATTG CGATGTTTAT CGATGGACAG
GCGCGGCGGC TGGGCGATCT TGCCGCCGGC ACGCTGGTGG TGCGCGAGCG CGCCGATGTG
ACGCTCGAAG GTCTCGTTAC ACGTGCTGCG CCGGACATGC CGCCGCCGTC CGGCGATACG
ACTGATCTGA TCGATGTCAG TCTGCTGACA CCCAACGATT ATGCGCTGCT GTGCGACTTT
CTCGATCAGC GACGCGACCT GGCGCAGCCG GTGCGTCGGC GCCTGGCGGC GCAACTCGGC
GAAGGATTGC AGGCGCGGCT GGGTGTGTTG CCTGAAAGTG ATCCAGAGCG CCTGATCGAA
CGTGTGGCGC GCGCGTATCA GTATCAGCGA CGCCGGGGAT CATAG
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| Protein sequence | MVSGDYIVET PEQIELAYDL AGIGSRFLAA IVDSALIALA ESALFFALAQ IAGAMEFAES
VLIAIGAALG FAILWGYYIA FELTWNGQSP GKRLIGLRVV SEGGRPITVT GSIIRNLIRI
VDFLPFLYGI GVIAMFIDGQ ARRLGDLAAG TLVVRERADV TLEGLVTRAA PDMPPPSGDT
TDLIDVSLLT PNDYALLCDF LDQRRDLAQP VRRRLAAQLG EGLQARLGVL PESDPERLIE
RVARAYQYQR RRGS
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