| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3437 |
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| Symbol | |
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| ID | 5540936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4484968 |
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| End bp | 4486968 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895555 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433505 |
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| Protein GI | 156743376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.54517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0867765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTT TCCCCGCCCG ACCGTTGCCG ACCCTGCCCG GCGCTCTTGC ACTGCTCGTG
ATTGCACTCC TGTCTGCCTG CGCCGGCGCC GTGCCGTCAT TGCCCCCTTC CCATCTTCCT
GTGATTGCGT CGCCGACGGT TGCGCCGTCT GTCACTCCGT CATCCGTGCC TGTCGCTTCT
ATCCGCCCCA CCGCATCTAT CGTGCCCGTT ACCGCTCCCA TCGACGAACT GACGACGATT
GCCGCTGCCG TCCCTGCTCC TCGTGATCAG CGCGCGATCA GTGCGGCGTT CCATGGCGGC
GACATCCCCT ATGTGGCCCG GACGATGCCG CTCGACGTTC GGATTGGCGC AACCGAGACC
TTCTGGGTGG CTGATGTCTC GAACAATGTG AACTATACTG TCACAGCACA ACTGCGTTAC
GCCGGTCCGG TTGTGTTGAT GTATATTGAT ACGACGCTCG ATGTCCCGCA ACATCTGATC
GAGCAGTCGG CGCAGGTCTT CGAGGAACGG ATCTACCCGC GTAATCGCTT GTTGTTCGGT
GAGGAACGCA TCCCCGGCGT CGATGGCGAC GCGCGACTGA CGATTCTCAA TACCCGCATT
CGCGGAGCAG GCGGGTATTT TTCGTCAGCC GATGGCGTGA CGCGCGCGGT CAATCGTTTC
AGCAACGAGC GTGAGATGTT CGTCATCGAC GCAGTCGCCT TCCCTCCCGG CAGCGAGACC
TACAACGCAA CGCTGGCGCA TGAGTTTCAG CATATGATCC ACTGGCACCG TCAGCCACGC
AGCCCAACAT GGTTTAACGA AGGTCTCTCG ATGCTCGCCG AGGACCTGAA TGGATTGGGC
GACAATGGCG CGGCATTGGC GTATCTCCGC AATCCCGACA CGCAACTGAC GACGTGGGCG
CCGGGAAGCG GCGTTACGCG CCACTACGGT GCAGCGCAAC TCTTCATGCG CTATCTGTAT
GAACAGTATG CTGGCGACAG TCGCCCCGCC GACTGGATCG ACGCTGATGC GGGCAACAAT
GTGCATGTTC TGGCAAATCT CGCCGCTTAC CGTCGCCCCG ATATTGTCAC CTTCGCGGAT
CTGTTTGCCG ATTGGGCAGT CGCCAATGCC TTGAATGATC CATATGTGGA CGATGGACGC
TATGCGTATC GTGGCATTCC GACGCGCGCC GCAACGATGC GCCTTGAACC GGGAACAACC
TCCGCTACAG TGCGTCAGTT TGGAGTGGAT TACATGGGTC CGCTCGACGG TCCGCTGGCA
ATCGATTTCG ATGGCGCCGA TACGGTGCAG TTGGTTGGAG TGTTGCCGGC CGAAGGGCGC
TTCGCCTGGT GGAGCAATCG CGGCGATGAA AGCGTCTCGA CACTGACGCG ACACCTCGAT
CTGCGCAGTG TGTCGCGCGC AACGCTCACG TTTCGTCTCT GGCACGAACT TGAGCGCGAC
TACGACTATG CCTTCGTCAC CGTCTCCAAC GACGGCGGTA CGCACTGGCA GACGCTCCCC
GGCATCACCA CTCGTGCCGA CGATCCGCAG GGGCACAACA TGGGGTACGG ATTCACCGGC
GTCAGCGGCG CGCCGGATGT CGCCCTCGGC GGCGTGCGCG GACGCTGGAT CGACGAGCGC
ATCGACCTGA CGCCGTTCGT CGGTCAGGAC GTTCTGCTGC GCTTCTGGGT CATCTCCGAT
GCGGCGATCA ACGGTCCTGG CATGCTGATC GATGATATTC GAGTTCCGGA GATTGGCTTC
GCCGATGGCG CCGAAACCGA TGACGGCGGA TGGGACGCGA TAGGGTTCGT GCGCACATCC
GGCATTCTTC CGCAACGCTG GGTCGTGCGG TTGCTGTTGT TCGACAGCGA TGAAACGCGG
GTGATCATTC CAGAGATCGA TAATCAGGGG CGCATCAGCC TCCGGGTCGC TGCCGGGCAG
CGCGCAATAC TGCTGGTTAG CGGCGCGACT CATTTCACGA CTGAACCGGC TTCGTACCGA
GTCAATCTGT ATCAACCGTG A
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| Protein sequence | MNRFPARPLP TLPGALALLV IALLSACAGA VPSLPPSHLP VIASPTVAPS VTPSSVPVAS
IRPTASIVPV TAPIDELTTI AAAVPAPRDQ RAISAAFHGG DIPYVARTMP LDVRIGATET
FWVADVSNNV NYTVTAQLRY AGPVVLMYID TTLDVPQHLI EQSAQVFEER IYPRNRLLFG
EERIPGVDGD ARLTILNTRI RGAGGYFSSA DGVTRAVNRF SNEREMFVID AVAFPPGSET
YNATLAHEFQ HMIHWHRQPR SPTWFNEGLS MLAEDLNGLG DNGAALAYLR NPDTQLTTWA
PGSGVTRHYG AAQLFMRYLY EQYAGDSRPA DWIDADAGNN VHVLANLAAY RRPDIVTFAD
LFADWAVANA LNDPYVDDGR YAYRGIPTRA ATMRLEPGTT SATVRQFGVD YMGPLDGPLA
IDFDGADTVQ LVGVLPAEGR FAWWSNRGDE SVSTLTRHLD LRSVSRATLT FRLWHELERD
YDYAFVTVSN DGGTHWQTLP GITTRADDPQ GHNMGYGFTG VSGAPDVALG GVRGRWIDER
IDLTPFVGQD VLLRFWVISD AAINGPGMLI DDIRVPEIGF ADGAETDDGG WDAIGFVRTS
GILPQRWVVR LLLFDSDETR VIIPEIDNQG RISLRVAAGQ RAILLVSGAT HFTTEPASYR
VNLYQP
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