| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3432 |
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| Symbol | |
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| ID | 5540931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4475230 |
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| End bp | 4478124 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895550 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001433500 |
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| Protein GI | 156743371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0164906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCT GGAAGATCAC ACCACGACGT CTCATCGCCG GCGCAACGCT GTTGCTTGCG
ACCATCGCGC TTATTCTCCC GTCGTACTCG TCGGATGCTC AGGAACAGGC GGGTGATTTG
CTGCCGGAGC GAACCGTTGC ACCACCCGCA GGCGACGCGA TGCTGGCGTC AATCACTGCC
GCCGGGGAAT ACTTCACGTC GCCGGTGCAG ACGACGCGCC TGTTCAGTCA TCTGGTGCTG
CGGTATGGAG CACAGGTTCC TGCGGGCGCA ACATTGAGTC TGTTTGTGCG CGTATCCGCC
GATGGCGCTG CCTGGACCAA CTGGACTGAA GTTGTTGGCG GCGATGATAT GCGTCGCCCC
GAAGATGCTC CCGATGTCGT GTGGAGCGAC ATCATCGACG CCGGCGCATT GATGCGCTTC
TGGCAGGCGC GGGTGGTTAT GGCGCCGGCG CCGGATGGCG CACTTCCGTC TGTTGGCGCC
ATCGAAGCGC ACACCGTTGA TGCACTGACC GGTCCCGACG CACCGCCTGC TGCCGACTTC
GTCCATCCGC AGTACCTTGG TCCGGCAAAG CCGCCGGTAG TATCGCGCAC TTCCTGGGGA
TCGCCGGATG GTCAGGGAAG CCGCGCCAGA CCCGCATACT ACCCGGTGAA CCATATCATC
GTCCACCACA CTGCCGACGG CAACACCCTG ACGCCGGGGC AACCGAATTG GGCAGCGCGT
GTGCGCGCGA TCTGGTCGTA TCACACGATA ACGCGCCAGT GGGGTGACAT TGGCTACAAC
TACCTGATCG ACCCCAACGG CGTGATCTAT GAAGGTCGTG CGGGCGGCGA CGATGCGGTC
GGGTTTCACG ATACCGCCAA CTACGGTTCG ATGGGGATTG CGCTGATCGG AACCTACTCC
GGCGTGGCGC CAACTCCCGC CGCGCAAGAA GCGCTGGTGC GCCTGATCGC CTGGAAAGCG
GCGCAGAAGG ATATTGATCC GCTGGGGCGC TCGTACTACT ACGGATGTTC TCGCTCGAGC
CGCTGTTTGC CGTTCAATCC TGGCGCGATT GTGCCAAATA TCGCCGGTCA TCGCCAGGTG
ACTCCGGGGC ACACCACGTG TCCGGGTGAT GCGACGATGG CAATCCTGCC CGATCTGCGC
AACCGGGTGC TGGCGTTGAT GCGCGGCAGT GGCGGAACCC ACGACAATGG CGATCTGGTC
ATCGATGAGC GTGAGAGCAG CTTCAGCCGA AGCGCCGCCA ACTGGTACAG CGCACCATGC
GGCGCCGGCG ACCACGCATT CTACACCTTT GCCACCAACA ACCCGGCGGA GAGTGCAAAC
CGCGGCGTCT GGCGCCCGAA CCTGCCGCAC CGTGGCGCGT ATCGTGTGCT GGCGCACATC
CCGCGCAACT GCGGGGTAGG TCTACTGACG AGCAATGCCC GATACGTGGT GCATAGCGCG
GCGGGCAGCA TCGTCGTTCC CATCAACCAG GATAATCTCG AGGGATGGGT CGATCTTGGC
GTCTACACTT TCGATGCAGG GAACAATGGC GGCGTTGAAC TCGACGATCT GACCGGCGAG
GCGCTCGCTG CCCGGCGTGT CATTCTGTTC GATGCGATCA AATGGGTTCC TGAGAATCCG
CAGGCGTCCG CACAGATCAT CGCGGTGCGC TTTGAACGCG ACACGCTCGC GGCGGGCGAT
CTGGTTCGCG TGGATGTAAC GGTGCGCAAC ACCGGATCAA CGACGATCAT AGGGCAGGAC
CCGCGAGTTG ATCTGACTGC CGGCGGCGGC ATGAACGATC CCGCCAATGC CTACGTTTAC
GAGCAGCACG AGTGTTTTGC GGGCAGTCCG ACCGGTGCAT TCCCGGCATT TCCGAAAGAA
GCCGGCAGGA TGCGCGTCAC ACTTGGGATG TCTGGCTGGG GTGCGCTGTA CGGCAACGGA
TGCGCCGGTC CGACCTCTGA TCATCCGTGG CGCTGGGGAC TCAACCATGA ACTGGCGCCC
GGTGAAGAGC AAACCATTGT CGGCTATGTG CGCTTCCACA CCCCTGGAAC ATACACGCTA
CGCGCCGGAC TGATCCACGA ATATGTTCGC TATCTGGCGC AGGATGCTAG CGTGACGACT
ATCACCATCA CCGATGAGCG CACCCCGCCC GATGCCGCAA CATTCGATGA ATGGCTGCGT
CCTACAGCGC GCGTGTATCG CCTCGGTTCT GCGCCCGATA GTCTTCTGGC GCGCGCCGGT
GATGCACAGG CGCTGCCGTT GGGCGAGGAA GTCGGCAGTT TTTCCTGGCA GGGGGAACTG
CTCGATTGGG GCGACGGCGG ACCACTGGGG TTGACCGATC ACTTTGCCGT CGTTCAGACG
CGCACCTTTT ACGCGCCGGT CAGTGGTGAA TACACTTTCC GCACGATCAG CGACGACGGA
TCGTGGTTGC TGGTCAATGG GCGCACCGTC GTGGCGAACG GCGGTCTCCA TGACCGATCC
GAAGCGACCG GAACCATCTA TCTCGATTCC GGGCTGCATG CGCTGTCGGC TATCTTCTTT
GAACGGCGCG GCATGGCGGC AGCGGGTTAT GACGTGCGGC TACCAGGTTC GTCGGTGTTC
CAGCCAATCC CCGACGGATT GAGCGACGTG CCACGTTTTG GTGGCACATT TGCTGAACCG
ACAACAATCG CGCTCACGGC GGACGACCGG GGCGGCAGCG GCGTTTCGGC GCTCCGCTGG
AGCGTAAACG GAGCGCCATG GCAGACAACC GCAGGACCCA TTGCGCGCAT TGATTTTTCG
GCGAATGGGA CATATCGTGT GCGCTATCAG GCGGTCGATG TGGTGGGCAA TGAGGGTCCC
GTCCGCGAAC TGACGGCGCG GGTCGATACG AATCTGACGA TCCATCGTGT GGCATTGCCG
GTGATGGTGC GGTAA
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| Protein sequence | MRIWKITPRR LIAGATLLLA TIALILPSYS SDAQEQAGDL LPERTVAPPA GDAMLASITA
AGEYFTSPVQ TTRLFSHLVL RYGAQVPAGA TLSLFVRVSA DGAAWTNWTE VVGGDDMRRP
EDAPDVVWSD IIDAGALMRF WQARVVMAPA PDGALPSVGA IEAHTVDALT GPDAPPAADF
VHPQYLGPAK PPVVSRTSWG SPDGQGSRAR PAYYPVNHII VHHTADGNTL TPGQPNWAAR
VRAIWSYHTI TRQWGDIGYN YLIDPNGVIY EGRAGGDDAV GFHDTANYGS MGIALIGTYS
GVAPTPAAQE ALVRLIAWKA AQKDIDPLGR SYYYGCSRSS RCLPFNPGAI VPNIAGHRQV
TPGHTTCPGD ATMAILPDLR NRVLALMRGS GGTHDNGDLV IDERESSFSR SAANWYSAPC
GAGDHAFYTF ATNNPAESAN RGVWRPNLPH RGAYRVLAHI PRNCGVGLLT SNARYVVHSA
AGSIVVPINQ DNLEGWVDLG VYTFDAGNNG GVELDDLTGE ALAARRVILF DAIKWVPENP
QASAQIIAVR FERDTLAAGD LVRVDVTVRN TGSTTIIGQD PRVDLTAGGG MNDPANAYVY
EQHECFAGSP TGAFPAFPKE AGRMRVTLGM SGWGALYGNG CAGPTSDHPW RWGLNHELAP
GEEQTIVGYV RFHTPGTYTL RAGLIHEYVR YLAQDASVTT ITITDERTPP DAATFDEWLR
PTARVYRLGS APDSLLARAG DAQALPLGEE VGSFSWQGEL LDWGDGGPLG LTDHFAVVQT
RTFYAPVSGE YTFRTISDDG SWLLVNGRTV VANGGLHDRS EATGTIYLDS GLHALSAIFF
ERRGMAAAGY DVRLPGSSVF QPIPDGLSDV PRFGGTFAEP TTIALTADDR GGSGVSALRW
SVNGAPWQTT AGPIARIDFS ANGTYRVRYQ AVDVVGNEGP VRELTARVDT NLTIHRVALP
VMVR
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