| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3431 |
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| Symbol | |
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| ID | 5540930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4473996 |
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| End bp | 4475009 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640895549 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001433499 |
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| Protein GI | 156743370 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00846703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGAACA TCCTGGTCAC CGGCGGCGCC GGTTTTATCG GCAGCAACTT CGTCGAATTA
CTGCTGAACA CATATCCCGA CTACCGGATC GTCGTCTATG ATAAATTGAC CTATGCGGGA
CGGTTGGAGA ACCTGGCGCG CTTTCAGGAC AATCCACACT TTGCGTTTGT GCGCGGCGAC
ATCTGCGATC CCGTCGCAGT GCGCGAGACG ATCCGCATAT ACGACATCGA TACCCTGGTC
AACTTTGCCG CCGAGACGCA TGTTGATCGT TCGATAATGG ACCCCGACGC CTTTATTCGC
ACTGATGTCT ACGGGACCTA TGTGCTGCTC GAAGCAGTGA AAGAAATGAA ACTCGAGCGC
GCTCTGTTTG TCAGCACCGA TGAAGTCTAC GGACACATCG AACCGGGGCA TTCCTCGTCG
GAAGACGATC CACTCAAGCC ACGTTCTCCC TATGCGGCAT CGAAGGCTGG CGGCGAACAT
CTGGTGTACG CCTACTATAT CACCTATGGG CTGCCGGTGC TGATCACTCG CGGCACGAAC
AATATCGGTC CCTACCAGTA TCCCGAAAAA GCCGTGCCGC TCTTCATCAC GAACGCGATT
GACGATATTC CACTGCCGCT CTACGGCGAC GGACGGCAAA TGCGCGACTA CCAGTATGTG
ATGGATCACT GCGAGGGGAT TGATGTCGTG TTACACCGTG GCGCCATTGG CGAAGCGTAC
AACATCGGCT CAGGCGTCGA AACCGAAAAT ATTGTCATGG CAAAGGCGAT CCTTGATCTG
CTGGGCAAAC CCTACTCGCT GATCCAGCCG GTGGCGGACC GACCGGGGCA CGACCGACGC
TACTCGGTCC GTACCGACAA AATCAAGGCG TTGGGATGGC GCTCACGCCA TACCTTTGCG
CACGCAATCG AAAAAACCGT GCGCTGGTAC GTCGAAAACC AGGATTGGTG GCGTCCGATC
AAGTCGGGCG AGTTCAAGGA GTACTATCGC AAACAGTACC TGGAGCGAAC GTAA
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| Protein sequence | MRNILVTGGA GFIGSNFVEL LLNTYPDYRI VVYDKLTYAG RLENLARFQD NPHFAFVRGD
ICDPVAVRET IRIYDIDTLV NFAAETHVDR SIMDPDAFIR TDVYGTYVLL EAVKEMKLER
ALFVSTDEVY GHIEPGHSSS EDDPLKPRSP YAASKAGGEH LVYAYYITYG LPVLITRGTN
NIGPYQYPEK AVPLFITNAI DDIPLPLYGD GRQMRDYQYV MDHCEGIDVV LHRGAIGEAY
NIGSGVETEN IVMAKAILDL LGKPYSLIQP VADRPGHDRR YSVRTDKIKA LGWRSRHTFA
HAIEKTVRWY VENQDWWRPI KSGEFKEYYR KQYLERT
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