| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3419 |
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| Symbol | |
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| ID | 5540918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4454095 |
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| End bp | 4456794 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895537 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001433487 |
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| Protein GI | 156743358 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCG TTGTATCGGT TTTCCGCTCA CAAATCCGAT ACAAAATCAT CTTTCCTTAC
CTCGCGCTGA CCCTCGTTGT GATGATGACG GGTGCGGCGA TTGCGGTCGG TCTGGTGGCG
GCTTCGTGGG AAGAACGCCT CCAGAATCAG CTGGCGCAGG TGGCGCGCAA CTCGACGGAT
GCGCTTGTGC GGCGTGAGCG CAATCATTTG GAATTTCTGC GTCAGGTGGT GTTTGCGCCT
GCCAATAACG ATATTCCGGC GGTGGCGGAT GCCTTTGCCG GCGGAGACGC CGATCAGGTG
ATGCGCGCGC TCGATCCGTA CTATCGGTTC GGCGTGGGCA GCGTCAATCT CGATTTTGAT
CGCATGATCG CGTTTGACCG CGATGGTAAG ACATTGGTGG ATTGGCTGCG CGTTTCGGAG
AATCCTGCCG ATCCCCCGGT GCGGATTACA ACGACCGATC TCTCGGGCCT GGATTTTGTC
CGCTTGATCA TCTCCGGCGG GACGATCGAT GGAAACGACA AGTTCTCGAA CCTGATCTAT
TTTGCGCCGG ATGTGCAACC ATATTTTTAT ACGGTGGCGC CGGTGCGCAG AGAGAATCAA
GTGGTCGGCG GCGTGCTGAT CGCGGTTAAG TGTGATCGGT TGCTCCAGTC GCTTGAGCGC
AGCAGTCAGG CGGCAGTGAC CACATTTTAC GATCTGTCGG GGCGGGCTAT TAGCACGACG
CTGCTGCCGC GCGCGGAGTT GAGCGCGCTC GACATGCCGC CGCAGGTGTT GCAGGCGCTG
CTCAGCGGTC AGGCGCAGTC GATTTTTACG GTCGAACTGC GCCAGCGCGG GTATCAACTG
GCGTATAGTC CGCTGGTCAT TGCCAATGCA CAGGTGGGGT ATTTCTCGGT CGGTCTGTCA
CGCGATTTTC AGGTGCAGCA GTTATCGTTG AGCCGGAATG TGGTCGTTGC CATTGCCATG
GTGCTGGCAG CCGGATCGGT GATTCTGGGG TACCAGATTG CTCGACGAAT CACACGTCCG
CTGTCGGACC TGGTAGCAAC GGCGGAGGCA GTGACCGGCG GCGATCTCGA GGCGCGCTCG
ACGGTGATGT CGCCCGATGA GTTCGGTCGT CTGGCGCTGG CGTTCAATCA GATGACTGAG
CACCTGGCGC GGCTGTACCG CACCAGCCGT GATCTCAATC AGGCGATTGA AGTGACGCCG
GTGTTGAAGG TGACTGAACG CTCAGTGCGA TCCTTGCTGC CCGATATTGA TGTCCTGGCG
TTGATCGCAG AGGAAGGAGC GCTACGGTAT CATATTGATG AGGAATTGCC GGGAATTGTT
CGCAGCCTGC GGCATATTCG GGTGCCGTTG AGCGACCCGC TGGTGCAAGA ACTTGCTGCA
ATACAACGAG TTGTGCAGGT GTCTCCTGAT GAAGAGCCGC GTCTGGCGTC GTTTGGTCTG
ACGCAAGTCG CCGGGTATCA GAGCTTGATC CTGTCACCAC TGGTGGTGCA GGGAGAACCG
GCGGGCCTGT TGATCCTGGC ACATCGCAAC CCCCATGCGT TCGACAGTAG TATATTGCCG
TCGCTGATCG CAATTGCTAA TATGACCACC AGCGTGCTCT ACAATGCGGT GCTCTTTGAT
CGGGTCCAGA GCGAAGCGCT GCGGCGGCGC GCGATTCTTG AGTCGATTGC CGATGGGGTG
ATTGTGCTGG ATCGCCAACG GTATATCGTG ATCGTCAATC GTGCTGCTGA GCAGATGCTG
AATATGCACG ACTGGCAGTT CGTTCGACGT TCCTTCAGTG AAATTCCACT CGTGCGTGTC
AATGTCCGGC ATGAAGTGTT CAGCGAAAAT GGTACAGGAC ATCGCGAGCA TTTCCGTTTT
GGCGATCGCG TATTGAGCCT GAGCAGCGCG CCGGTGATCA CGGGAGAAGG TTATCAAATT
GGTGAAGTGG TTGTTTTGCA TGATATTTCG GCGGAAGCGG CAGTTGATCG CGCGAAAACG
GATTTCATTG CCACCGTTTC GCATGAATTG CGCTCACCGT TGACCGTGAT CTACGGCTAT
GTCGATCTGT TGCTTCGCGG ACTGGTTGGG GAATTGAGTG GCGATCAGTA TGATTTGCTC
GAAGCAGTGC GGAATCGGGT TGAATTGATG AACAATATTG TCAAAAATGT TATTCTGGTC
GCCAGCATTG AAGCCAATAC GCTTCAGACC GATCTGGCCC CTCAGGATGT GCGGCGTCTC
ATCGATGAGA CGATTGCGCC GATGCGCAAG GCGTTCGAGC GTAAGGGTCT GACATTGACG
GTGAATACGC CAGACGATCT GCCGCCGGTA CGCGCAGACC GTGAACAACT GATGATTATC
CTTGGGCAGG TGATCGATAA TGCCCGCCGC TATACGCCGC AAGGCGAAGT GGCGATCACG
GCGCATCGGC GCGATGATGG GATGGTGCAG ATCGATGTTG CTGACACGGG TCCCGGCATT
CCTGCCGATC AGATGCCACG CCTGTTTACC CGTTTCTTCC GTGTGGAAGG CAATAATTCG
CCTGAGCGCG GCAGCGGTCT TGGTCTGGTG ATTACACGAC AACTGGTTGA GCGCCACGGT
GGCAAAGTGT GGGCGCAAAG CGAAGTTGGG CGCGGCAGCA CATTTAGCAT AGCACTCCCT
ATCGCCCATG AGTACTCAGA CGCCATCTCC AGCCCACGCG CAACGCAGGC GACAGCCTGA
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| Protein sequence | MRGVVSVFRS QIRYKIIFPY LALTLVVMMT GAAIAVGLVA ASWEERLQNQ LAQVARNSTD
ALVRRERNHL EFLRQVVFAP ANNDIPAVAD AFAGGDADQV MRALDPYYRF GVGSVNLDFD
RMIAFDRDGK TLVDWLRVSE NPADPPVRIT TTDLSGLDFV RLIISGGTID GNDKFSNLIY
FAPDVQPYFY TVAPVRRENQ VVGGVLIAVK CDRLLQSLER SSQAAVTTFY DLSGRAISTT
LLPRAELSAL DMPPQVLQAL LSGQAQSIFT VELRQRGYQL AYSPLVIANA QVGYFSVGLS
RDFQVQQLSL SRNVVVAIAM VLAAGSVILG YQIARRITRP LSDLVATAEA VTGGDLEARS
TVMSPDEFGR LALAFNQMTE HLARLYRTSR DLNQAIEVTP VLKVTERSVR SLLPDIDVLA
LIAEEGALRY HIDEELPGIV RSLRHIRVPL SDPLVQELAA IQRVVQVSPD EEPRLASFGL
TQVAGYQSLI LSPLVVQGEP AGLLILAHRN PHAFDSSILP SLIAIANMTT SVLYNAVLFD
RVQSEALRRR AILESIADGV IVLDRQRYIV IVNRAAEQML NMHDWQFVRR SFSEIPLVRV
NVRHEVFSEN GTGHREHFRF GDRVLSLSSA PVITGEGYQI GEVVVLHDIS AEAAVDRAKT
DFIATVSHEL RSPLTVIYGY VDLLLRGLVG ELSGDQYDLL EAVRNRVELM NNIVKNVILV
ASIEANTLQT DLAPQDVRRL IDETIAPMRK AFERKGLTLT VNTPDDLPPV RADREQLMII
LGQVIDNARR YTPQGEVAIT AHRRDDGMVQ IDVADTGPGI PADQMPRLFT RFFRVEGNNS
PERGSGLGLV ITRQLVERHG GKVWAQSEVG RGSTFSIALP IAHEYSDAIS SPRATQATA
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