| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3398 |
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| Symbol | |
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| ID | 5540897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4430214 |
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| End bp | 4432010 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895516 |
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| Product | ABC transporter related |
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| Protein accession | YP_001433466 |
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| Protein GI | 156743337 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.273417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATCA ACCGGCGTTC GCGCCATATG CTCAATGCTG GCGAAATGCT TCCTGTTCGC
GCCGTTGACT GGCGCCGTTT GTTGACGTAC CTGAACCCCT ACCGGCGGCA TATGGCAGGC
GCGCTGCTGG CGCTGACGGG TGCAAGCGCC ATCAATCTCG GCTTCCCGCT CGTCATTGTG
CAACTCCTGG AAGCGGTGCT TCAGCAAGGC AATCAGACGC TGCTGACAAA CCTGACGCTG
GCGCTGATCG CTCTTTTCTT TATCCAGGCA TTGCTGACAT TTTTGCAGGG TTACATGCTC
AACATCGTCG GCGAGCGGAT TGTCCTCGAT ATGCGGGTGC AGCTGTATCG CCACTTGCAC
GCGCTATCGT TGAGTTTCTT CGCCAACCGG CGCGTTGGCG AACTTGTGTC GCGCATTTCC
AGCGATGTGA CGCAAGTGCG CGCCATCCTG ACGAACAATG TCACCCAATT CCTGTCGAGC
ATTGTTGCGC TGATCGGCGC GATCATCATT GTGTTCCTGC TCAACCCGCG ATTGGTGGGG
TTCGTGTTGG CGCTGGCGAT CAGCGTCGTC GCCGTTGCGG CAATCTTTGG ACGCTGGCTG
CAACGCTTCA GCACCCGCGT GCAGGACGAA CTGGCAGACG CGACGGTGGC GGTCGAAGAG
GGATTGCAGG GCGTGCGGGT CGTCAAGAGT TTCGTTCGCG AGTCCTATGA AATCGAACGG
TACGAACGCG CGATGCAGCG TACGCTGAAG GCGGCGTTGC GCCTCGCGCT GCTGCGATCC
GGGTTCGGCG GCCTGATGGC GTTTCTGGGG TTCAGCGGCA TCGCGGCGAT CCTCTGGTTC
AGCGGCAGTG AGGTGCTGGC AGGACGAATG TCGTTTGCGA CGATCAGCGG TTTTCTGATC
TACGCCATCA CCATTGGCGC CAGCCTGGCG CAACTCTCCG GTTTGTATGG GCAGTTCCGC
GAAGCAGTCG GCGCAGTGCG GCGTGTCTTT GAAATTCTTG ATACGCAACC AACGATCAAA
GACGTGCCGG ATGCATGTGA TCTGCCGCCA GTGCGCGGCG AGATCACGTT CGATCACGTA
TCGTTCGAGT ACGAAACCGG GCAAGGGGTG CTGCACGACA TTACGCTGAC GGTGCAGCCA
GGCGAAATCG TGGCGCTGGT CGGACCGAGC GGCGCCGGCA AGAGCACGCT GTTCAACCTG
ATCCCACGTT TCTACGACCC GACATCCGGG CGTGTTCTGA TCGACGGATA CGACCTGCGG
AGCGTCACGC AGCGCAGTCT GCGCGAGCAG ATCGGACTGG TGCCGCAGGA AACGATGCTC
TTCGGCGGCA CGATCCGCGA GAATATCGTC TATGGAAAAT TGGACGCCAA CGAAGAAGAC
ATCATCGCGG CAGCAAAGGC TGCGAATGCG CACGATTTCA TTATGGCGAT GCCACGCGGG
TACGACACGC TGGTCGGCGA GCGCGGCATC AAACTGAGCG GCGGGCAGCG CCAGCGCATT
GCGATTGCGC GCGTGATGCT GAAGAACCCG CGTATCCTGC TCCTCGACGA AGCCACGAGT
TCGCTCGACA GCGAATCGGA GGCGCTGGTG CAAGAAGCGT TCGAGCGCCT GATGCGCGGG
CGCACTTCGG TCATTATTGC GCATCGTCTC AGCACCGTGT CGATTGCCCA CCGGATCATC
GTGCTCAACC ATGGGCGCAT CGTTGAGCAG GGAACCCACG AGGAACTGCT GGCGCAGCAG
GGATTGTATG CGCGTCTCTA TGCCTTGCAA TTCCGCGAAG GCGTAACGGT GGGGTAG
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| Protein sequence | MMINRRSRHM LNAGEMLPVR AVDWRRLLTY LNPYRRHMAG ALLALTGASA INLGFPLVIV
QLLEAVLQQG NQTLLTNLTL ALIALFFIQA LLTFLQGYML NIVGERIVLD MRVQLYRHLH
ALSLSFFANR RVGELVSRIS SDVTQVRAIL TNNVTQFLSS IVALIGAIII VFLLNPRLVG
FVLALAISVV AVAAIFGRWL QRFSTRVQDE LADATVAVEE GLQGVRVVKS FVRESYEIER
YERAMQRTLK AALRLALLRS GFGGLMAFLG FSGIAAILWF SGSEVLAGRM SFATISGFLI
YAITIGASLA QLSGLYGQFR EAVGAVRRVF EILDTQPTIK DVPDACDLPP VRGEITFDHV
SFEYETGQGV LHDITLTVQP GEIVALVGPS GAGKSTLFNL IPRFYDPTSG RVLIDGYDLR
SVTQRSLREQ IGLVPQETML FGGTIRENIV YGKLDANEED IIAAAKAANA HDFIMAMPRG
YDTLVGERGI KLSGGQRQRI AIARVMLKNP RILLLDEATS SLDSESEALV QEAFERLMRG
RTSVIIAHRL STVSIAHRII VLNHGRIVEQ GTHEELLAQQ GLYARLYALQ FREGVTVG
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