Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3391 |
Symbol | |
ID | 5540890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4421168 |
End bp | 4422523 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895509 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_001433459 |
Protein GI | 156743330 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCATA TCAGGCGCAT GCCGGTGTCA GCGCTGGAAA GCGAGTTTCT GCCTATGTCT CCGCTTGCCG AGCATATCGT TCTCCGCGAT CTGGACATCG AAAACATCGC TGATTTCGAC GTCTATCTTC AGCATGGCGG TTATGAGGCA TTGCGCATCG CAGTGACCGA ACGCACTCCG GCTGATATTG TGCAGACGGT GAAGGACTCT GGGTTGCGCG GGCGTGGCGG CGCCGGGTTT CCTACCGGCG TGAAGTGGGG GTTTCTGCCC AAAGGGGTCT ATCCGCGCTA CCTGCTCTGC AACTGTGATG AGAGCGAACC TGGCACCTTC AACAATCATC AGATTATCGA CCGCAACCCG CATCAGTTAA TCGAGGGCAT TGCGATTTCC GCCTACGCCA TCGAAGCCAA TCTTGCGTAT ATCTATATTC GCGGTGAGTT CGCCGCGGCT GCGCGTCGTC TCGAACGCGC TATTGCGCAG GCGTATGCAC GTGGTTTCCT GGGCAGGAAT ATCTTTGGCA CGGGGTACGA CCTTGACATT TATGTGCATC GTGGCGCAGG GGCGTACATC TGCGGCGAAG AAACAGCACT CATGGAGTCG CTCGAAGGGA AGATCGGTCA ACCCCGCTTG CGCCCTCCCT TTCCGGCGGT CGCCGGTCTG TACGGTAAGC CAACGATTAT CAATAACGTC GAGACGCTGA CGAATGTGCC GATGATCGTG CGTCACGGCG CCGTCTGGTA TCGTCAGTTC GGCACGGAGA AAAGTCCGGG CACGAAGGTG TTCTCCGTCT CCGGTCACGT GAAGCGCCCC GGCAACTATG AAGCGCCGTT CGGCACACCC TTGCGCGAAT TGATCTTTTC TCCCGAGTAC TGCCAGGGCA TGCGCGGCAA CCATAATGTC AAGATTGTCG TGCCTGGCGG CGCCTCAGCC GGCTGGCTCA CCGCCGATGA TCTCGATGTG ACGATGGACT ACGAGGCGCT GGCGGCGAAG GGGAGCATGC TCGGTTCCGG CGGCGTGATT GTGCTCGATG AACGCGTTAA CGCTGTCGAG GTGGCGTATA AGATGGACGA GTTCTTCAAG CACGAATCGT GCGGAAAGTG TACGCCGTGC CGTGAAGGGA CGTATTTTCT GGTCAAGGTG CTGCACCGCA TCACGCATGG TCACGGTCGC CAGGATGATA TTCCGCTCCT GCACGATGTG TACAATCAAA TGGCGGGCAA TTGCTTCTGC CTTCTGGGGG AGAGCGCCGT CGTGCCGATC CGCAGTGCGC TGCGTCTTTT CCCGCACGAG TTCGAGCGGG CGATCGCGCA GGCAGGCAAT GGACGCCACG ACATCATCAC GCTGTCGGTT CACTGA
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Protein sequence | MRHIRRMPVS ALESEFLPMS PLAEHIVLRD LDIENIADFD VYLQHGGYEA LRIAVTERTP ADIVQTVKDS GLRGRGGAGF PTGVKWGFLP KGVYPRYLLC NCDESEPGTF NNHQIIDRNP HQLIEGIAIS AYAIEANLAY IYIRGEFAAA ARRLERAIAQ AYARGFLGRN IFGTGYDLDI YVHRGAGAYI CGEETALMES LEGKIGQPRL RPPFPAVAGL YGKPTIINNV ETLTNVPMIV RHGAVWYRQF GTEKSPGTKV FSVSGHVKRP GNYEAPFGTP LRELIFSPEY CQGMRGNHNV KIVVPGGASA GWLTADDLDV TMDYEALAAK GSMLGSGGVI VLDERVNAVE VAYKMDEFFK HESCGKCTPC REGTYFLVKV LHRITHGHGR QDDIPLLHDV YNQMAGNCFC LLGESAVVPI RSALRLFPHE FERAIAQAGN GRHDIITLSV H
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