| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3381 |
|---|
| Symbol | |
|---|
| ID | 5540880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4408935 |
|---|
| End bp | 4409804 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640895499 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_001433449 |
|---|
| Protein GI | 156743320 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAG CCACGATAGG ACGCTGTCAG GTCCTTGGCG AAATCGGGCG TGGCGGTATG
GCGACGGTGT ACCGCGCCTA CGACCGCGAA GCCGACCGCG AAGTGGTGAT CAAAGTCCTG
CCGCGCGAAC TGCTGCACGA CCCCACTTTC CGCGCCCGCT TCCAGCGCGA GATCAAAGCA
GTCACCGCGC TGGAGCACCC CGCGATTGTG CCGCTCTATG ACTCCGGTGA GGATGCCGGG
CAGCCGTTTA TGGTCATGCG CCTGATGACC GGCGGCTCGC TGGCGGATCG GCTCAGACAC
GGACCGCTGA CCCTCGCACA GGCGGCACGG ATTATCAGCC ATCTGGCAAC CGCCCTCGAC
GCAGCGCACG TCGCCGGATC GATCCACCGC GACATCAAGC CCGACAACGT GCTCTTTGAC
CACACTGACC AGCCGTATCT CGCCGATTTC GGCATCGTCA GCGTGATGCA GACCGCCACC
ATCCTAACGC GCAGCGGCGT GATCGGCACG CCGGAGTACA TGGCACCGGA ACTGACCCGG
CCCGGCGGGC TCTCGCCGCT GATGGACGTG TATGCACTGG GGGCGATGCT GTTCGAGATG
CTGAGCGGGC GACCGCCATA CCACGCCGAT ACGCCGATTG GCGCGCTGAT TGCGCACGTG
ACCGAGCCGA TCCCGGATGT GCGGATGCTG CAACCCGCGT TGCCTGCTGA CATCCAGCGC
GTCCTCGAGC AGGCGCTGGC GAAGGACCCG CAGGAACGCT ACCAGTCGGC AGGCGCGCTG
GCGGGTGACC TGGCGGCCGT CGCGGCGAAT ACGTCCCTGC CGACGCTCAA GGTAGCGGTG
TCCGTTGCAC AGGTGACCGT CACCCTCTAA
|
|---|
| Protein sequence | MTPATIGRCQ VLGEIGRGGM ATVYRAYDRE ADREVVIKVL PRELLHDPTF RARFQREIKA
VTALEHPAIV PLYDSGEDAG QPFMVMRLMT GGSLADRLRH GPLTLAQAAR IISHLATALD
AAHVAGSIHR DIKPDNVLFD HTDQPYLADF GIVSVMQTAT ILTRSGVIGT PEYMAPELTR
PGGLSPLMDV YALGAMLFEM LSGRPPYHAD TPIGALIAHV TEPIPDVRML QPALPADIQR
VLEQALAKDP QERYQSAGAL AGDLAAVAAN TSLPTLKVAV SVAQVTVTL
|
|---|
| |