| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3376 |
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| Symbol | |
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| ID | 5540875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4404431 |
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| End bp | 4406410 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895494 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001433444 |
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| Protein GI | 156743315 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTGC CTGACATGTC TCTCCTGGCT TCGCTCAACC CCAAACAATA CACAGCCGTC
ACTGCGCCTC CCGGTCCAAT CCTGGTGCGC GCCGGAGCCG GCAGCGGCAA AACGCGCGTG
TTGACGCTGC GGATCGCATA CCTGATTGCG GAGTGTGGTG TGTCCCCATC GCACATTCTG
GCGCTCACGT TTACCAATAA GGCGGCGCGT GAAATGCGAC AGCGCCTGCG CAATCTGCCC
GGCGTATCGA TCCGAGGTCT CACTGCTGGC ACGTTCCATT CGGTCTGTGC AGCGTTGTTG
CGCGAACATA TCACCGGTCG CATTGGCAGG TACACATCCG ATTTTACGAT CTACGCCGAA
GATGAGCAGG CGCAACTGGC AGCGTTGGCG CTCGACGCAG CGCGGGAACG TCCGCCGGTC
CTCCTCGAAC CGACAGAACT GCTCCGTCAC ATTTCGCGCG CCAAGAGTCG GTTGCTCACC
CCGCGCCTGG CAGCGCGCTT CGCCCGTGAT GACCTGGAGC GTTTCGTCGC TGGATGTTAC
CAGCGTTATC AGCGCAGCCT GGAACACGCC AACGCGCTTG ATTTCGATGA TCTGATTCTG
CTGACCCACC GGTTGCTCGC CGAACATCCC GATGTGTTGG ACACCTGCCA GGCGCGCTGG
CGGCATGTTC TGATCGACGA GTATCAGGAC ACCGATCCGG CGCAGTACGC GCTGGTCGAG
TTACTGACGC GCCCATCACC CGCCAATGGA CATGTGCGCT CGCTCTTCGC CGTTGGTGAT
GGGATGCAGG CGATCTACGG CTTCCGCAAC GCCGACCATA CGATCATTGC GCGATTCGAG
CGCGATTTTC CCGAAGCGCG AGTGATCGAA CTGGCGACAA ACTATCGCAG CCGCCAACCG
ATCCTCGATG CCGCCTATGC GGTCATCCGT CATAGTCGTG CAGTTCAGCC CATGGCGCTG
CGCGCAACGA AACCGGAGCC GCCGCGCGGC GCCGGGCATG TTCCGCCGCT CCAGATTGTG
GACGCCAAAG ATGCGCGCGA TGAAGCCGAA CGTGTGACGC GCAGCATCGT CGATCTCCTG
CGACGTGGGC GTCGTCCACG CGACATAGCG ATCCTCTACC GTTCACGCCA TATGAGCCGC
ACATTTGAAT CAGCGCTGCG TCATGTACGC ATCCCATATG CGTTGCGTGG CGCAACCGGG
TTCTTCGAGC GCGCCGTGGT GCGTGATACG CTGGCATACC TGCGTGTTGT CAACAATCCC
GCCGACAATC TGAGCTTCAA CCGGATTGCC AATGTGCCGC CGCGTGGACT GGGCGCCGGC
GCGCTGGCGA CGCTTTCCGC CTTTGCCGCG CAGCGAGGAT TATCTCTCTC CGAAACACTG
GCACATCCCG AGGTCCTTGC GGCGCTGTCG CCAAAAGCCG CAGAGAGCGC GCGACAACTG
GCGGCGCTGT TCGTCCGCTG GCGGCGGCTT GTAGACGGCG GCATGCCCCC TGATCATGTG
CTGGCTGATG TGCTCGAACG TATCGGCTAC CAGGCGTGGC TCGAGCAACG CCTGGAACCG
GAGGAACTGG CAGATGCGCG CGCTCATGTG CAGGAACTGG CGAATGCCGC TGCCGAGCAT
ACTGCGCTCA ATGCCTTCCT GCAAGAAGTG GCGTTACTGA CCAGCGCCGA TGATGACGAT
GATGAACGTG ATCGGGTGCA GTTGTCCACC ATCCACGCAG CCAAAGGTCT GGAGTGGCCC
ATCGTATTCG TTGCGGGTCT GGAGGAAGGG ACGCTGCCGC ACGAACACAG CCTGGTGACG
CCGGATGGCG TGGAGGAAGA ACGTCGCCTC TGCTACGTTG CGCTGACCCG TGCCGGCGAG
CAACTGTACC TTTCCTGGGC GGCAAGCCGG GTGCGCGGAA AACCGACGAA ACCATCACGA
TTCCTCAACG AAATCGAGGC ATATGGGCGC GAGCGGGCGG GGAGAAACGT CGCATCATAA
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| Protein sequence | MILPDMSLLA SLNPKQYTAV TAPPGPILVR AGAGSGKTRV LTLRIAYLIA ECGVSPSHIL
ALTFTNKAAR EMRQRLRNLP GVSIRGLTAG TFHSVCAALL REHITGRIGR YTSDFTIYAE
DEQAQLAALA LDAARERPPV LLEPTELLRH ISRAKSRLLT PRLAARFARD DLERFVAGCY
QRYQRSLEHA NALDFDDLIL LTHRLLAEHP DVLDTCQARW RHVLIDEYQD TDPAQYALVE
LLTRPSPANG HVRSLFAVGD GMQAIYGFRN ADHTIIARFE RDFPEARVIE LATNYRSRQP
ILDAAYAVIR HSRAVQPMAL RATKPEPPRG AGHVPPLQIV DAKDARDEAE RVTRSIVDLL
RRGRRPRDIA ILYRSRHMSR TFESALRHVR IPYALRGATG FFERAVVRDT LAYLRVVNNP
ADNLSFNRIA NVPPRGLGAG ALATLSAFAA QRGLSLSETL AHPEVLAALS PKAAESARQL
AALFVRWRRL VDGGMPPDHV LADVLERIGY QAWLEQRLEP EELADARAHV QELANAAAEH
TALNAFLQEV ALLTSADDDD DERDRVQLST IHAAKGLEWP IVFVAGLEEG TLPHEHSLVT
PDGVEEERRL CYVALTRAGE QLYLSWAASR VRGKPTKPSR FLNEIEAYGR ERAGRNVAS
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