Gene Rcas_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3315 
Symbol 
ID5540813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4327693 
End bp4329105 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content61% 
IMG OID640895433 
Productbifunctional enoyl-CoA hydratase/phosphate acetyltransferase 
Protein accessionYP_001433384 
Protein GI156743255 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG0280] Phosphotransacetylase
[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.287925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.745735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAT ATATCGAAAA TCGCACCTTC GACGAAATCA AGATCGGCGA TCGGGCATCG 
CTGACACGCA CCCTGACCAA ATCCGACATT GAGTTATTTG CGGTCATGTC CGGCGATGTC
AATCCCGCGC ATCTCGATGA GGAGTATGCC CGCAGCGACA TCTTCCACAA GATCATCGCT
CACGGCATGT GGGGCGGGGC GCTGATCTCG ACCGTGCTCG GCACGATGCT CCCCGGTCCC
GGCACCATCT ACCTGAGCCA GACGCTGCGC TTCCGCCGTC CGGTCGCCAT CGGCGACACG
ATCACCGTGG CGGTCACGGT GACGGCCAAA GATGCGGAGA AGCGCCGGGT GACGCTCGAC
TGCCAGTGTA CCAACCAGCA TGGCGAAGTC GTCATCAGTG GCAGCGCCGA GGTGCTCGCA
CCCACCGAGA AGGTCAAGCG TCAACGGGTC AGTCTGCCCG AAGTATTGCT GCACAAACCC
GGCGCAAACT ACGAAGCGGT CATTCAACGC GCATCAATGC TGGGAACGGT GCGCGCGGCA
GTGGTGTTCC CTGCTGAGCC GGCTGCGCTT CATGGCATTA TCGAAGCAAC CCACGCAAAC
CTGATCGATC CGATTATTAT CGGACCCGAA GCGCCGCTGC GACGAGTGGC GGAAACGCTG
GACATCAACC TGAGCGCCTT CCGCCTCGAA CCGACAACCG ACGGTCGAGC CGCAGCCGCG
CGGGCCGTCG CTCTGGCGCG CGCCGGAACC GTCGAGGCAA TTGTCGATCC TGGGGTGCGC
TATTACGGAC TTTTGCACGA ACTGGTCGCG CGCGACACCG GTATCGCCGA CCATCGGCGC
ATGAGCCATA TTTACGCCAT GGACGTTCCC AACTACCCTC GCTTGCTCCT GATTACCGAC
GCAGGAATGA ACACCGACCC AACCCTGGAA GAGAAGCGGG CAATCGTGCA GAATGCCATC
GATCTGGCGT TGGCGCTCGG CATCGAACAA CCGAAAGTCG CCATCCTCGC CGCAGTCGAG
ACGATCAGCC CGAAACTTCG TTCAACGCTC GATGCCGCAG CGCTATGCAA GATGGTCGAC
CGCGGGCAGA TCGTCGGCGG CATTGTGGAC GGACCGCTTG CTTTCGAGAA TGCCGTTTCA
CCGGAAGCGG CACGGCGGGC AAAACTGACC TCATTGGTCG CAGGTCAGGC GGATATTCTC
GTTGCGCCAG ACCTGGAAGC AGGTACGATG CTGGTGCAAC AACTTGATCA CCTGGCAAAT
GCGCAATCTG CGGGCATTAT CGTTGGCGGG CGCGTACCGG TGGCATTACC CGAACCAAGC
GGGAACCCGC AGAGTGTTCT GGCAGCATGC GCAATGGCGG TGCTGGTCGC ACGGAATGGC
ACAGAACGGC AGGACGACGG GATGATGGGA TGA
 
Protein sequence
MTEYIENRTF DEIKIGDRAS LTRTLTKSDI ELFAVMSGDV NPAHLDEEYA RSDIFHKIIA 
HGMWGGALIS TVLGTMLPGP GTIYLSQTLR FRRPVAIGDT ITVAVTVTAK DAEKRRVTLD
CQCTNQHGEV VISGSAEVLA PTEKVKRQRV SLPEVLLHKP GANYEAVIQR ASMLGTVRAA
VVFPAEPAAL HGIIEATHAN LIDPIIIGPE APLRRVAETL DINLSAFRLE PTTDGRAAAA
RAVALARAGT VEAIVDPGVR YYGLLHELVA RDTGIADHRR MSHIYAMDVP NYPRLLLITD
AGMNTDPTLE EKRAIVQNAI DLALALGIEQ PKVAILAAVE TISPKLRSTL DAAALCKMVD
RGQIVGGIVD GPLAFENAVS PEAARRAKLT SLVAGQADIL VAPDLEAGTM LVQQLDHLAN
AQSAGIIVGG RVPVALPEPS GNPQSVLAAC AMAVLVARNG TERQDDGMMG