Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3282 |
Symbol | |
ID | 5540780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4262763 |
End bp | 4263875 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895400 |
Product | nucleotidyl transferase |
Protein accession | YP_001433351 |
Protein GI | 156743222 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.404178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAG TCATTCTGGT CGGTGGTCTC GGCACCCGTC TGCGACCGCT GACGTGCAAC ACACCCAAGC CGATGATTCC GCTGGTCAAC CAGCCATTCA TCGTCCACGT GCTCGAAAAT CTGCGCAACC AGGGGATCGA TGAAGTCATT CTGTGCGTGC AGTATCTCGC CGACCGGTTC CGTGAGGCGC TCGGCGATGG TTCGGTATTG GGCTTGAAGA TTCACGTCAT CGAAGAGCCG GAGCCGCTCG GCACCGCCGG CGCGGTGAAG AATGTCGAGC ATATGCTCGA TGGCTCGACA TTCGTTTTCA ATGGCGATGT GTTGACCGAC CTCGACCTGC GGGCAATGCT GGCGTTCCAC CGCGAACGCG GCAGCAAGTT GACCATTGCG CTGACGCCGG TTGAAGACCC AACCGCATAT GGGCTGGTCG AAATGGACGA AACCGGTCAC ATCCGCCGCT TTATGGAAAA ACCGCGCGTC GATGAGATCA CCTCGAACCT GATCAATGCC GGAACATACA TTATCGAACC AGAACTTTTC CGCTATGTTC CCCCCAAACA GCACTATATG TTCGAGCGTG GGCTGTTCCC GGTGGTGCTG CAAACGCGCG ATCCCATGTA CGGCTACCCC TCGCCAGCAT ATTGGACCGA CATTGGCACG CCGTCGGCGT ACCTGGAGGT GCATCACGAT ATTCTGGTGG GGAAAGTGCG CTACCGCTTT CACGGCAAAG AGATCGGCAA CCGCGTCTGG CTGGTTGGCG ATGCCGACAT TCACCCGCGC GCTCAGGTGA TCGGTCCGGT CGTCATCGGT CCAGGGGTGA AAATCGGCGC CGGCGCGCAG ATCATCGGTC CGACCGTCAT CGGCGCAGGA TGCGTCATCG GTGCGCAGGC ACGGATCGAG GGCGCCGTCC TCTGGGAGAA CAATCAGATC GCCGAAGGTG TGGCGTTGCG ATCGTGTGTG GTGGGCAGCC ACAACCAGAT CGGTGCGCGC ACCCACATCA CCGACGGCGC CGTCGTCGGC GACTCGTGCA TCATCGAAGC GGACAATCGC CTGGAGCGCG GCATTCGCAT CTGGCCCGAA ACCCACCTGA AAGAGCGTTC CATCTCCTTC TGA
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Protein sequence | MKAVILVGGL GTRLRPLTCN TPKPMIPLVN QPFIVHVLEN LRNQGIDEVI LCVQYLADRF REALGDGSVL GLKIHVIEEP EPLGTAGAVK NVEHMLDGST FVFNGDVLTD LDLRAMLAFH RERGSKLTIA LTPVEDPTAY GLVEMDETGH IRRFMEKPRV DEITSNLINA GTYIIEPELF RYVPPKQHYM FERGLFPVVL QTRDPMYGYP SPAYWTDIGT PSAYLEVHHD ILVGKVRYRF HGKEIGNRVW LVGDADIHPR AQVIGPVVIG PGVKIGAGAQ IIGPTVIGAG CVIGAQARIE GAVLWENNQI AEGVALRSCV VGSHNQIGAR THITDGAVVG DSCIIEADNR LERGIRIWPE THLKERSISF
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