Gene Rcas_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3277 
Symbol 
ID5540775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4255038 
End bp4255838 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content63% 
IMG OID640895395 
Productphosphoribosylformylglycinamidine synthase I 
Protein accessionYP_001433346 
Protein GI156743217 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01737] phosphoribosylformylglycinamidine synthase I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.328671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.366992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGA CGCCGCGTGT TCTCATTTTG CGCGCCGCCG GCATTAATCG CAACAGCGAC 
GCTGCGCTGG CAATCGAACT TGCGGGAGGG CGCCCGGAGA TGGTCCATAT CAACCGACTC
ATTGCCGGCG AACGGCGACT GATGGACTAT GCGATGCTGG TCGTTCCAGG AGGGTTTTCA
TATGGCGATC ATCTGGGCGC AGGAAAACTT TTGGCAATCG ATCTGATCCA TTGCCTTGGC
GATCAGATCA CACGATTCGT CGCGGATGGT CGTCCGGTGA TCGGCATCTG CAACGGCTTC
CAGGCGCTCG TGAAAGCCGG CATCCTTCCC GGAATACAAT TGGACGGCAG TAGCGACACT
CCGCAGTCGG TGACGCTCAC CGACAATGCT TCCGGTCGCT TCGAGTGCCG CTGGGTGCGC
CTGGCTGCCG ACCCGACCAG CGTGTGCGTC TTCACCCGCG GCATCGAGCG CCCGCTTGAG
GTTCCTGTTG CGCATGGCGA AGGGCGCTTC GTGGCGCGCA ACGACGCCAC CCTCGCCGCG
CTGCGCGCCG CCGGACTGGT GGCGCTGCGC TACATCGCCG CCAATGGTGG ACCGCCCTCG
TACCCGGAGA ACCCGAATGG CTCCGAGGAT CATATCGCCG GAATCTGCAA TCCTGGCGGC
AATGTGCTGG GGCTGATGCC GCACCCGGAG AACGCAGCGT TGCCGCACCA GCATCCGCGC
TGGACGCGCG AACCACTGCG GAACGAAGGG GATGGGTTGG CTCTCTTTCG GAATGCGATC
CGGTATGCGC AAGGGATGTG A
 
Protein sequence
MGKTPRVLIL RAAGINRNSD AALAIELAGG RPEMVHINRL IAGERRLMDY AMLVVPGGFS 
YGDHLGAGKL LAIDLIHCLG DQITRFVADG RPVIGICNGF QALVKAGILP GIQLDGSSDT
PQSVTLTDNA SGRFECRWVR LAADPTSVCV FTRGIERPLE VPVAHGEGRF VARNDATLAA
LRAAGLVALR YIAANGGPPS YPENPNGSED HIAGICNPGG NVLGLMPHPE NAALPHQHPR
WTREPLRNEG DGLALFRNAI RYAQGM