Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3255 |
Symbol | |
ID | 5540753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4229860 |
End bp | 4230288 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895374 |
Product | NusB antitermination factor |
Protein accession | YP_001433325 |
Protein GI | 156743196 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.489842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGTC TGCGGCACCG AGTGCGCGCA ATTGCGCTCC AAATTCTGTT TGAACTCGAT GCAACCGACC ATCCGCCGGA TCAGGTAGTG GGGCGGCGCC TCGAGGAAGA GCAGCTGCCG CCAGAAGGTG AGCGTTTTTT GCGACGATTG GTGTTCGGTG CATGGGAACA TGCGGCGCAC CTCGACCGGA TTATCGAGGA GGCTGCGCCG AACTGGCCCG TCAGCCAGAT GCCGGGAGTG GATAAGGCTA TTCTGCGGAT CGCCCTCTTC GAGGCTCTGA TCGACAAAGA GGAAAAGACA CCGCTGAAGG CGATCATCAA CGAGGCGGTC GAACTTGCCA AGCAGTATGG CAGCGATAAT TCGAGCCGCT TTGTCAACGG CGTTCTCGGC ACAGTCGTCA GTCGCTACCG CGAGCGGAGC AAAGGGTAG
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Protein sequence | MASLRHRVRA IALQILFELD ATDHPPDQVV GRRLEEEQLP PEGERFLRRL VFGAWEHAAH LDRIIEEAAP NWPVSQMPGV DKAILRIALF EALIDKEEKT PLKAIINEAV ELAKQYGSDN SSRFVNGVLG TVVSRYRERS KG
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